Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scaf8Q6DID3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scaf8Q6DID3 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scaf8Q6DID3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scaf8Q6DID3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scaf8Q6DID3 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Scaf8Q6DID3 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Scaf8Q6DID3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scaf8Q6DID3 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC17.72■□□□□ 0.43
Scaf8Q6DID3 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC17.72■□□□□ 0.43
Scaf8Q6DID3 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Scaf8Q6DID3 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC17.72■□□□□ 0.43
Scaf8Q6DID3 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC17.72■□□□□ 0.43
Scaf8Q6DID3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.72■□□□□ 0.43
Scaf8Q6DID3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scaf8Q6DID3 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Scaf8Q6DID3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scaf8Q6DID3 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scaf8Q6DID3 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scaf8Q6DID3 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scaf8Q6DID3 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scaf8Q6DID3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.72■□□□□ 0.43
Scaf8Q6DID3 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Scaf8Q6DID3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Scaf8Q6DID3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf8Q6DID3 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Scaf8Q6DID3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf8Q6DID3 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.71■□□□□ 0.43
Scaf8Q6DID3 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC17.71■□□□□ 0.43
Scaf8Q6DID3 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.71■□□□□ 0.43
Scaf8Q6DID3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.71■□□□□ 0.43
Scaf8Q6DID3 Gm12091-201ENSMUST00000146791 830 ntBASIC17.71■□□□□ 0.43
Scaf8Q6DID3 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.71■□□□□ 0.43
Scaf8Q6DID3 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC17.71■□□□□ 0.43
Scaf8Q6DID3 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf8Q6DID3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf8Q6DID3 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf8Q6DID3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf8Q6DID3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf8Q6DID3 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf8Q6DID3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scaf8Q6DID3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Scaf8Q6DID3 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.71■□□□□ 0.42
Scaf8Q6DID3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Cd63-ps-201ENSMUST00000145417 875 ntBASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Gm24694-201ENSMUST00000180054 110 ntBASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Gm27663-201ENSMUST00000184839 110 ntBASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Shd-206ENSMUST00000225145 998 ntBASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scaf8Q6DID3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Scaf8Q6DID3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Scaf8Q6DID3 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scaf8Q6DID3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scaf8Q6DID3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scaf8Q6DID3 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.69■□□□□ 0.42
Scaf8Q6DID3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scaf8Q6DID3 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scaf8Q6DID3 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scaf8Q6DID3 Gm11478-201ENSMUST00000117851 599 ntBASIC17.69■□□□□ 0.42
Scaf8Q6DID3 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Scaf8Q6DID3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scaf8Q6DID3 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scaf8Q6DID3 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC17.69■□□□□ 0.42
Scaf8Q6DID3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Scaf8Q6DID3 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scaf8Q6DID3 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scaf8Q6DID3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scaf8Q6DID3 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.69■□□□□ 0.42
Scaf8Q6DID3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms