Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Gm45743-201ENSMUST00000212701 2795 ntBASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav3-1Q5R1I8 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav3-1Q5R1I8 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav3-1Q5R1I8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms