Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav3-3Q5R1C3 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Il3ra-202ENSMUST00000223589 738 ntBASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 AC135637.1-201ENSMUST00000227750 365 ntBASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Trav3-3Q5R1C3 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-3Q5R1C3 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-3Q5R1C3 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-3Q5R1C3 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-3Q5R1C3 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-3Q5R1C3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav3-3Q5R1C3 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-3Q5R1C3 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-3Q5R1C3 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-3Q5R1C3 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-3Q5R1C3 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
Trav3-3Q5R1C3 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-3Q5R1C3 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-3Q5R1C3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav3-3Q5R1C3 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-3Q5R1C3 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-3Q5R1C3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-3Q5R1C3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-3Q5R1C3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-3Q5R1C3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-3Q5R1C3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-3Q5R1C3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-3Q5R1C3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-3Q5R1C3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav3-3Q5R1C3 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav3-3Q5R1C3 Matn2-206ENSMUST00000228570 2798 ntBASIC11.46□□□□□ -0.58
Trav3-3Q5R1C3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3-3Q5R1C3 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3-3Q5R1C3 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Trav3-3Q5R1C3 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3-3Q5R1C3 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Trav3-3Q5R1C3 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3-3Q5R1C3 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
Trav3-3Q5R1C3 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav3-3Q5R1C3 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.46□□□□□ -0.58
Trav3-3Q5R1C3 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 Gm20760-201ENSMUST00000179197 648 ntBASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav3-3Q5R1C3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms