Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Scn1bP97952 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Scn1bP97952 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1bP97952 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1bP97952 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1bP97952 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1bP97952 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.98□□□□□ -0.17
Scn1bP97952 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Scn1bP97952 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.98□□□□□ -0.17
Scn1bP97952 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1bP97952 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.98□□□□□ -0.17
Scn1bP97952 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.98□□□□□ -0.17
Scn1bP97952 Gm18115-201ENSMUST00000221209 621 ntBASIC13.98□□□□□ -0.17
Scn1bP97952 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1bP97952 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1bP97952 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Scn1bP97952 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Scn1bP97952 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1bP97952 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1bP97952 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1bP97952 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1bP97952 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1bP97952 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Scn1bP97952 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.98□□□□□ -0.17
Scn1bP97952 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Scn1bP97952 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Scn1bP97952 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn1bP97952 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn1bP97952 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Scn1bP97952 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Scn1bP97952 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn1bP97952 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn1bP97952 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn1bP97952 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.97□□□□□ -0.17
Scn1bP97952 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn1bP97952 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scn1bP97952 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Scn1bP97952 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Scn1bP97952 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn1bP97952 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn1bP97952 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Scn1bP97952 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Scn1bP97952 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scn1bP97952 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scn1bP97952 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Scn1bP97952 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13.97□□□□□ -0.17
Scn1bP97952 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn1bP97952 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Scn1bP97952 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn1bP97952 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn1bP97952 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn1bP97952 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn1bP97952 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Scn1bP97952 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Scn1bP97952 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
Scn1bP97952 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Scn1bP97952 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scn1bP97952 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Scn1bP97952 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Scn1bP97952 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Scn1bP97952 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Scn1bP97952 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Scn1bP97952 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn1bP97952 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn1bP97952 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.96□□□□□ -0.17
Scn1bP97952 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Scn1bP97952 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn1bP97952 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scn1bP97952 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Scn1bP97952 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn1bP97952 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn1bP97952 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Scn1bP97952 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Scn1bP97952 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn1bP97952 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.96□□□□□ -0.17
Scn1bP97952 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn1bP97952 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn1bP97952 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Scn1bP97952 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Scn1bP97952 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn1bP97952 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scn1bP97952 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scn1bP97952 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1bP97952 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Scn1bP97952 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1bP97952 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1bP97952 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1bP97952 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.95□□□□□ -0.18
Scn1bP97952 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1bP97952 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1bP97952 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1bP97952 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1bP97952 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1bP97952 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1bP97952 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1bP97952 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1bP97952 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1bP97952 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scn1bP97952 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.95□□□□□ -0.18
Scn1bP97952 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms