Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcdP82347 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcdP82347 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.17□□□□□ -0.14
SgcdP82347 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.17□□□□□ -0.14
SgcdP82347 Mir3081-201ENSMUST00000175305 84 ntBASIC14.17□□□□□ -0.14
SgcdP82347 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SgcdP82347 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcdP82347 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcdP82347 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcdP82347 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SgcdP82347 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SgcdP82347 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcdP82347 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcdP82347 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SgcdP82347 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SgcdP82347 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
SgcdP82347 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SgcdP82347 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.17□□□□□ -0.14
SgcdP82347 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SgcdP82347 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
SgcdP82347 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcdP82347 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcdP82347 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SgcdP82347 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
SgcdP82347 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SgcdP82347 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcdP82347 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SgcdP82347 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.16□□□□□ -0.14
SgcdP82347 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcdP82347 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.16□□□□□ -0.14
SgcdP82347 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcdP82347 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcdP82347 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SgcdP82347 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
SgcdP82347 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcdP82347 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcdP82347 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcdP82347 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SgcdP82347 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcdP82347 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SgcdP82347 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.16□□□□□ -0.14
SgcdP82347 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.16□□□□□ -0.14
SgcdP82347 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
SgcdP82347 Gm18421-201ENSMUST00000204122 625 ntBASIC14.16□□□□□ -0.14
SgcdP82347 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcdP82347 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SgcdP82347 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcdP82347 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcdP82347 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcdP82347 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
SgcdP82347 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SgcdP82347 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcdP82347 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
SgcdP82347 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SgcdP82347 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcdP82347 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcdP82347 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcdP82347 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcdP82347 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcdP82347 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcdP82347 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcdP82347 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
SgcdP82347 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SgcdP82347 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcdP82347 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SgcdP82347 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SgcdP82347 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SgcdP82347 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcdP82347 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SgcdP82347 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SgcdP82347 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcdP82347 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SgcdP82347 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcdP82347 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SgcdP82347 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcdP82347 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.15□□□□□ -0.14
SgcdP82347 Gm11950-201ENSMUST00000121615 838 ntBASIC14.15□□□□□ -0.14
SgcdP82347 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SgcdP82347 Gm6623-201ENSMUST00000173570 544 ntBASIC14.15□□□□□ -0.14
SgcdP82347 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.15□□□□□ -0.14
SgcdP82347 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SgcdP82347 Mzt1-203ENSMUST00000227948 952 ntBASIC14.15□□□□□ -0.14
SgcdP82347 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcdP82347 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcdP82347 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SgcdP82347 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcdP82347 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcdP82347 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcdP82347 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
SgcdP82347 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcdP82347 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcdP82347 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SgcdP82347 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcdP82347 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SgcdP82347 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SgcdP82347 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcdP82347 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SgcdP82347 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
SgcdP82347 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.15□□□□□ -0.14
SgcdP82347 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms