Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rpl39P62892 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Rpl39P62892 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Rpl39P62892 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl39P62892 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC10.89□□□□□ -0.67
Rpl39P62892 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl39P62892 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl39P62892 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl39P62892 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl39P62892 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl39P62892 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl39P62892 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl39P62892 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Rpl39P62892 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl39P62892 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl39P62892 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC10.89□□□□□ -0.67
Rpl39P62892 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC10.89□□□□□ -0.67
Rpl39P62892 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC10.89□□□□□ -0.67
Rpl39P62892 CT025689.6-201ENSMUST00000224991 1104 ntBASIC10.89□□□□□ -0.67
Rpl39P62892 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC10.89□□□□□ -0.67
Rpl39P62892 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl39P62892 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl39P62892 Prkcz2-201ENSMUST00000206136 1756 ntBASIC10.89□□□□□ -0.67
Rpl39P62892 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl39P62892 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl39P62892 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl39P62892 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl39P62892 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Rpl39P62892 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl39P62892 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl39P62892 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl39P62892 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl39P62892 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC10.89□□□□□ -0.67
Rpl39P62892 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC10.89□□□□□ -0.67
Rpl39P62892 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl39P62892 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl39P62892 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl39P62892 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl39P62892 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl39P62892 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl39P62892 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Rpl39P62892 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC10.89□□□□□ -0.67
Rpl39P62892 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39P62892 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC10.88□□□□□ -0.67
Rpl39P62892 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39P62892 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39P62892 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39P62892 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39P62892 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39P62892 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39P62892 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39P62892 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39P62892 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39P62892 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39P62892 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39P62892 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39P62892 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC10.88□□□□□ -0.67
Rpl39P62892 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39P62892 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39P62892 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Rpl39P62892 Gm37722-201ENSMUST00000193757 208 ntBASIC10.88□□□□□ -0.67
Rpl39P62892 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39P62892 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Rpl39P62892 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC10.88□□□□□ -0.67
Rpl39P62892 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39P62892 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39P62892 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39P62892 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC10.88□□□□□ -0.67
Rpl39P62892 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC10.88□□□□□ -0.67
Rpl39P62892 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39P62892 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Rpl39P62892 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39P62892 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Rpl39P62892 Gm43509-201ENSMUST00000196551 2594 ntBASIC10.88□□□□□ -0.67
Rpl39P62892 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39P62892 Gm12620-201ENSMUST00000119791 1986 ntBASIC10.88□□□□□ -0.67
Rpl39P62892 Gm12612-201ENSMUST00000140182 1986 ntBASIC10.88□□□□□ -0.67
Rpl39P62892 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39P62892 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Rpl39P62892 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39P62892 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Rpl39P62892 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Rpl39P62892 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rpl39P62892 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rpl39P62892 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rpl39P62892 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rpl39P62892 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rpl39P62892 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Rpl39P62892 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rpl39P62892 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rpl39P62892 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rpl39P62892 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rpl39P62892 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rpl39P62892 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rpl39P62892 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Rpl39P62892 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Rpl39P62892 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rpl39P62892 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rpl39P62892 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rpl39P62892 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms