Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Rps28P62858 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC9□□□□□ -0.97
Rps28P62858 Gm27322-201ENSMUST00000184007 104 ntBASIC9□□□□□ -0.97
Rps28P62858 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Gm18636-201ENSMUST00000218846 1066 ntBASIC9□□□□□ -0.97
Rps28P62858 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Zfp125-201ENSMUST00000079237 2488 ntBASIC9□□□□□ -0.97
Rps28P62858 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Gm43860-201ENSMUST00000201742 2705 ntBASIC9□□□□□ -0.97
Rps28P62858 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC9□□□□□ -0.97
Rps28P62858 Gm37269-201ENSMUST00000193906 1891 ntBASIC9□□□□□ -0.97
Rps28P62858 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Rps28P62858 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
Rps28P62858 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Rps28P62858 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rps28P62858 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rps28P62858 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rps28P62858 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Rps28P62858 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC8.99□□□□□ -0.97
Rps28P62858 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rps28P62858 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Rps28P62858 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Rps28P62858 Grk6-205ENSMUST00000224653 2976 ntBASIC8.99□□□□□ -0.97
Rps28P62858 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC8.99□□□□□ -0.97
Rps28P62858 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rps28P62858 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rps28P62858 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rps28P62858 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Rps28P62858 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Rps28P62858 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rps28P62858 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rps28P62858 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Rps28P62858 AC166359.1-201ENSMUST00000220243 1871 ntBASIC8.99□□□□□ -0.97
Rps28P62858 CT025681.1-201ENSMUST00000225453 1855 ntBASIC8.99□□□□□ -0.97
Rps28P62858 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rps28P62858 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rps28P62858 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rps28P62858 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Rps28P62858 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Rps28P62858 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rps28P62858 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rps28P62858 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Rps28P62858 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Rps28P62858 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Rps28P62858 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rps28P62858 Gm14371-201ENSMUST00000138925 1518 ntBASIC8.99□□□□□ -0.97
Rps28P62858 Gm44913-201ENSMUST00000208060 2990 ntBASIC8.99□□□□□ -0.97
Rps28P62858 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Rps28P62858 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rps28P62858 Nudt18-202ENSMUST00000228554 3619 ntBASIC8.99□□□□□ -0.97
Rps28P62858 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rps28P62858 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rps28P62858 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rps28P62858 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC8.99□□□□□ -0.97
Rps28P62858 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rps28P62858 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Rps28P62858 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Rps28P62858 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Rps28P62858 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC8.98□□□□□ -0.97
Rps28P62858 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC8.98□□□□□ -0.97
Rps28P62858 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC8.98□□□□□ -0.97
Rps28P62858 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Rps28P62858 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Gm5859-201ENSMUST00000165401 2324 ntBASIC8.98□□□□□ -0.97
Rps28P62858 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC8.98□□□□□ -0.97
Rps28P62858 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC8.98□□□□□ -0.97
Rps28P62858 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC8.98□□□□□ -0.97
Rps28P62858 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Gm18262-201ENSMUST00000222560 1946 ntBASIC8.98□□□□□ -0.97
Rps28P62858 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC8.98□□□□□ -0.97
Rps28P62858 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Rps28P62858 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms