Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nkx2-1P50220 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.66□□□□□ -0.38
Nkx2-1P50220 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.66□□□□□ -0.38
Nkx2-1P50220 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Gm7367-201ENSMUST00000057611 492 ntBASIC12.66□□□□□ -0.38
Nkx2-1P50220 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nkx2-1P50220 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-1P50220 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-1P50220 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-1P50220 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-1P50220 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-1P50220 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-1P50220 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nkx2-1P50220 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nkx2-1P50220 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-1P50220 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nkx2-1P50220 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Nkx2-1P50220 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.65□□□□□ -0.38
Nkx2-1P50220 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nkx2-1P50220 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC12.65□□□□□ -0.38
Nkx2-1P50220 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.65□□□□□ -0.38
Nkx2-1P50220 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nkx2-1P50220 Gm18101-201ENSMUST00000215769 548 ntBASIC12.65□□□□□ -0.38
Nkx2-1P50220 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-1P50220 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-1P50220 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nkx2-1P50220 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-1P50220 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-1P50220 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-1P50220 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-1P50220 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Nkx2-1P50220 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-1P50220 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-1P50220 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.65□□□□□ -0.38
Nkx2-1P50220 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.65□□□□□ -0.38
Nkx2-1P50220 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Nkx2-1P50220 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Nkx2-1P50220 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Nkx2-1P50220 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Nkx2-1P50220 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nkx2-1P50220 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms