Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tpm3P21107 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tpm3P21107 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm3P21107 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm3P21107 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm3P21107 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm3P21107 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.1■□□□□ 0.33
Tpm3P21107 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm3P21107 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm3P21107 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm3P21107 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm3P21107 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm3P21107 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm3P21107 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm3P21107 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Tpm3P21107 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.1■□□□□ 0.33
Tpm3P21107 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm3P21107 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm3P21107 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm3P21107 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Tpm3P21107 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.1■□□□□ 0.33
Tpm3P21107 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm3P21107 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.1■□□□□ 0.33
Tpm3P21107 Gm7213-201ENSMUST00000215977 950 ntBASIC17.1■□□□□ 0.33
Tpm3P21107 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm3P21107 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm3P21107 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm3P21107 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm3P21107 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm3P21107 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm3P21107 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm3P21107 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm3P21107 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm3P21107 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm3P21107 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm3P21107 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm3P21107 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.1■□□□□ 0.33
Tpm3P21107 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm3P21107 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm3P21107 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC17.1■□□□□ 0.33
Tpm3P21107 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.1■□□□□ 0.33
Tpm3P21107 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm3P21107 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tpm3P21107 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm3P21107 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.09■□□□□ 0.33
Tpm3P21107 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm3P21107 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.09■□□□□ 0.33
Tpm3P21107 Gm23547-201ENSMUST00000158210 271 ntBASIC17.09■□□□□ 0.33
Tpm3P21107 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.09■□□□□ 0.33
Tpm3P21107 Mir5122-201ENSMUST00000175004 89 ntBASIC17.09■□□□□ 0.33
Tpm3P21107 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm3P21107 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm3P21107 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Tpm3P21107 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Tpm3P21107 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm3P21107 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm3P21107 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm3P21107 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Tpm3P21107 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm3P21107 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm3P21107 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm3P21107 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm3P21107 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.09■□□□□ 0.33
Tpm3P21107 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tpm3P21107 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Tpm3P21107 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tpm3P21107 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.08■□□□□ 0.33
Tpm3P21107 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC17.08■□□□□ 0.33
Tpm3P21107 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tpm3P21107 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tpm3P21107 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.08■□□□□ 0.32
Tpm3P21107 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tpm3P21107 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tpm3P21107 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tpm3P21107 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tpm3P21107 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tpm3P21107 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.08■□□□□ 0.32
Tpm3P21107 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.08■□□□□ 0.32
Tpm3P21107 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.08■□□□□ 0.32
Tpm3P21107 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.08■□□□□ 0.32
Tpm3P21107 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tpm3P21107 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tpm3P21107 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tpm3P21107 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Tpm3P21107 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tpm3P21107 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.08■□□□□ 0.32
Tpm3P21107 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tpm3P21107 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tpm3P21107 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Tpm3P21107 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tpm3P21107 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm3P21107 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm3P21107 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm3P21107 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Tpm3P21107 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm3P21107 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm3P21107 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm3P21107 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm3P21107 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tpm3P21107 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms