Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Rb1P13405 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rb1P13405 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rb1P13405 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rb1P13405 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.61■□□□□ 0.09
Rb1P13405 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rb1P13405 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.61■□□□□ 0.09
Rb1P13405 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rb1P13405 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rb1P13405 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rb1P13405 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.61■□□□□ 0.09
Rb1P13405 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.61■□□□□ 0.09
Rb1P13405 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Rb1P13405 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rb1P13405 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
Rb1P13405 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.61■□□□□ 0.09
Rb1P13405 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rb1P13405 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rb1P13405 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rb1P13405 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rb1P13405 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rb1P13405 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Rb1P13405 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rb1P13405 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Rb1P13405 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rb1P13405 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
Rb1P13405 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rb1P13405 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rb1P13405 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rb1P13405 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rb1P13405 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rb1P13405 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rb1P13405 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rb1P13405 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.6■□□□□ 0.09
Rb1P13405 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rb1P13405 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rb1P13405 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rb1P13405 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rb1P13405 Gm15920-201ENSMUST00000118998 402 ntBASIC15.6■□□□□ 0.09
Rb1P13405 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Rb1P13405 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rb1P13405 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.6■□□□□ 0.09
Rb1P13405 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rb1P13405 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rb1P13405 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.6■□□□□ 0.09
Rb1P13405 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rb1P13405 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rb1P13405 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rb1P13405 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rb1P13405 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Rb1P13405 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
Rb1P13405 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.6■□□□□ 0.09
Rb1P13405 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rb1P13405 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rb1P13405 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rb1P13405 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rb1P13405 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Rb1P13405 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rb1P13405 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rb1P13405 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.6■□□□□ 0.09
Rb1P13405 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rb1P13405 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rb1P13405 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rb1P13405 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rb1P13405 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rb1P13405 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rb1P13405 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rb1P13405 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rb1P13405 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.59■□□□□ 0.09
Rb1P13405 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rb1P13405 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.59■□□□□ 0.09
Rb1P13405 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.59■□□□□ 0.09
Rb1P13405 Gm25911-201ENSMUST00000157621 56 ntBASIC15.59■□□□□ 0.09
Rb1P13405 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.59■□□□□ 0.09
Rb1P13405 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rb1P13405 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.59■□□□□ 0.09
Rb1P13405 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rb1P13405 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rb1P13405 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rb1P13405 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rb1P13405 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rb1P13405 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Rb1P13405 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rb1P13405 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rb1P13405 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rb1P13405 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.59■□□□□ 0.09
Rb1P13405 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Rb1P13405 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rb1P13405 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rb1P13405 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rb1P13405 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rb1P13405 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rb1P13405 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Rb1P13405 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rb1P13405 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rb1P13405 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Rb1P13405 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rb1P13405 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.58■□□□□ 0.08
Rb1P13405 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Rb1P13405 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms