Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nid1P10493 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nid1P10493 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nid1P10493 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nid1P10493 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nid1P10493 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Nid1P10493 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.29□□□□□ -0.12
Nid1P10493 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nid1P10493 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nid1P10493 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Nid1P10493 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nid1P10493 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nid1P10493 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nid1P10493 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nid1P10493 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.29□□□□□ -0.12
Nid1P10493 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.29□□□□□ -0.12
Nid1P10493 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nid1P10493 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.29□□□□□ -0.12
Nid1P10493 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nid1P10493 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nid1P10493 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nid1P10493 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nid1P10493 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nid1P10493 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nid1P10493 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nid1P10493 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nid1P10493 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nid1P10493 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nid1P10493 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nid1P10493 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Nid1P10493 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nid1P10493 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nid1P10493 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nid1P10493 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nid1P10493 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nid1P10493 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nid1P10493 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nid1P10493 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nid1P10493 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nid1P10493 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nid1P10493 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nid1P10493 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Nid1P10493 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nid1P10493 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.28□□□□□ -0.12
Nid1P10493 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nid1P10493 Gm13418-201ENSMUST00000119097 944 ntBASIC14.28□□□□□ -0.12
Nid1P10493 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nid1P10493 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.28□□□□□ -0.12
Nid1P10493 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.28□□□□□ -0.12
Nid1P10493 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.28□□□□□ -0.12
Nid1P10493 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.28□□□□□ -0.12
Nid1P10493 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.28□□□□□ -0.12
Nid1P10493 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nid1P10493 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nid1P10493 Birc2-201ENSMUST00000054878 378 ntBASIC14.28□□□□□ -0.12
Nid1P10493 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nid1P10493 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Nid1P10493 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nid1P10493 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.28□□□□□ -0.12
Nid1P10493 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Nid1P10493 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nid1P10493 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nid1P10493 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nid1P10493 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nid1P10493 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nid1P10493 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nid1P10493 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nid1P10493 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nid1P10493 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nid1P10493 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nid1P10493 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nid1P10493 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nid1P10493 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nid1P10493 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nid1P10493 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nid1P10493 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Nid1P10493 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nid1P10493 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nid1P10493 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nid1P10493 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nid1P10493 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nid1P10493 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.27□□□□□ -0.12
Nid1P10493 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nid1P10493 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nid1P10493 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nid1P10493 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nid1P10493 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.27□□□□□ -0.12
Nid1P10493 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Nid1P10493 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Nid1P10493 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Nid1P10493 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nid1P10493 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Nid1P10493 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nid1P10493 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Nid1P10493 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.27□□□□□ -0.13
Nid1P10493 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nid1P10493 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nid1P10493 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Nid1P10493 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Nid1P10493 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms