Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UbbP0CG49 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
UbbP0CG49 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
UbbP0CG49 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UbbP0CG49 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UbbP0CG49 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.28□□□□□ -0.28
UbbP0CG49 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UbbP0CG49 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UbbP0CG49 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UbbP0CG49 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UbbP0CG49 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UbbP0CG49 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UbbP0CG49 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.28□□□□□ -0.28
UbbP0CG49 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UbbP0CG49 Gm5587-201ENSMUST00000206270 674 ntBASIC13.28□□□□□ -0.28
UbbP0CG49 Gm45328-201ENSMUST00000210942 917 ntBASIC13.28□□□□□ -0.28
UbbP0CG49 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
UbbP0CG49 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UbbP0CG49 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.28□□□□□ -0.28
UbbP0CG49 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UbbP0CG49 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UbbP0CG49 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
UbbP0CG49 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
UbbP0CG49 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UbbP0CG49 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
UbbP0CG49 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UbbP0CG49 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UbbP0CG49 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UbbP0CG49 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.28□□□□□ -0.28
UbbP0CG49 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UbbP0CG49 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.27□□□□□ -0.28
UbbP0CG49 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
UbbP0CG49 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UbbP0CG49 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.27□□□□□ -0.28
UbbP0CG49 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UbbP0CG49 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
UbbP0CG49 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UbbP0CG49 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UbbP0CG49 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UbbP0CG49 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UbbP0CG49 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UbbP0CG49 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UbbP0CG49 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
UbbP0CG49 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UbbP0CG49 Gm15565-201ENSMUST00000118890 427 ntBASIC13.27□□□□□ -0.29
UbbP0CG49 Gm13312-201ENSMUST00000119631 718 ntBASIC13.27□□□□□ -0.29
UbbP0CG49 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.27□□□□□ -0.29
UbbP0CG49 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UbbP0CG49 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UbbP0CG49 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UbbP0CG49 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UbbP0CG49 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UbbP0CG49 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
UbbP0CG49 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UbbP0CG49 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
UbbP0CG49 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UbbP0CG49 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.27□□□□□ -0.29
UbbP0CG49 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UbbP0CG49 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UbbP0CG49 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
UbbP0CG49 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UbbP0CG49 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
UbbP0CG49 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UbbP0CG49 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UbbP0CG49 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
UbbP0CG49 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UbbP0CG49 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.27□□□□□ -0.29
UbbP0CG49 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
UbbP0CG49 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UbbP0CG49 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UbbP0CG49 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
UbbP0CG49 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UbbP0CG49 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.26□□□□□ -0.29
UbbP0CG49 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UbbP0CG49 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
UbbP0CG49 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UbbP0CG49 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UbbP0CG49 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UbbP0CG49 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
UbbP0CG49 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
UbbP0CG49 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.26□□□□□ -0.29
UbbP0CG49 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
UbbP0CG49 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.26□□□□□ -0.29
UbbP0CG49 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
UbbP0CG49 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UbbP0CG49 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UbbP0CG49 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.26□□□□□ -0.29
UbbP0CG49 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC13.26□□□□□ -0.29
UbbP0CG49 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
UbbP0CG49 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
UbbP0CG49 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UbbP0CG49 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
UbbP0CG49 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UbbP0CG49 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
UbbP0CG49 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
UbbP0CG49 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.26□□□□□ -0.29
UbbP0CG49 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UbbP0CG49 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
UbbP0CG49 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
UbbP0CG49 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms