Protein–RNA interactions for Protein: P09084

Pax1, Paired box protein Pax-1, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pax1P09084 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pax1P09084 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pax1P09084 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.41□□□□□ -0.42
Pax1P09084 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pax1P09084 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pax1P09084 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pax1P09084 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.41□□□□□ -0.42
Pax1P09084 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pax1P09084 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pax1P09084 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pax1P09084 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pax1P09084 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pax1P09084 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pax1P09084 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pax1P09084 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pax1P09084 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pax1P09084 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pax1P09084 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pax1P09084 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pax1P09084 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pax1P09084 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC12.4□□□□□ -0.42
Pax1P09084 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pax1P09084 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
Pax1P09084 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Pax1P09084 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pax1P09084 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pax1P09084 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Pax1P09084 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pax1P09084 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pax1P09084 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pax1P09084 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pax1P09084 Gm14913-201ENSMUST00000120011 1093 ntBASIC12.4□□□□□ -0.42
Pax1P09084 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.4□□□□□ -0.42
Pax1P09084 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Pax1P09084 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC12.4□□□□□ -0.42
Pax1P09084 AC153961.1-201ENSMUST00000217760 385 ntBASIC12.4□□□□□ -0.42
Pax1P09084 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pax1P09084 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.4□□□□□ -0.42
Pax1P09084 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pax1P09084 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pax1P09084 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Pax1P09084 Gm9987-201ENSMUST00000069768 567 ntBASIC12.4□□□□□ -0.42
Pax1P09084 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Pax1P09084 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pax1P09084 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Pax1P09084 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.4□□□□□ -0.42
Pax1P09084 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pax1P09084 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Pax1P09084 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pax1P09084 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pax1P09084 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pax1P09084 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pax1P09084 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Pax1P09084 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pax1P09084 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pax1P09084 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Pax1P09084 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pax1P09084 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pax1P09084 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pax1P09084 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pax1P09084 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pax1P09084 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.39□□□□□ -0.43
Pax1P09084 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Pax1P09084 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pax1P09084 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.39□□□□□ -0.43
Pax1P09084 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pax1P09084 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pax1P09084 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Pax1P09084 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pax1P09084 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pax1P09084 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pax1P09084 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pax1P09084 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pax1P09084 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pax1P09084 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pax1P09084 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pax1P09084 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pax1P09084 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pax1P09084 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pax1P09084 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pax1P09084 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pax1P09084 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pax1P09084 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pax1P09084 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pax1P09084 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pax1P09084 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pax1P09084 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pax1P09084 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pax1P09084 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pax1P09084 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pax1P09084 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pax1P09084 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pax1P09084 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.38□□□□□ -0.43
Pax1P09084 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pax1P09084 AC154849.3-201ENSMUST00000223733 1660 ntBASIC12.38□□□□□ -0.43
Pax1P09084 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pax1P09084 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pax1P09084 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pax1P09084 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Pax1P09084 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms