Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.28□□□□□ -0.12
IghmP01872 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.28□□□□□ -0.12
IghmP01872 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IghmP01872 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.28□□□□□ -0.12
IghmP01872 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IghmP01872 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IghmP01872 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IghmP01872 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IghmP01872 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
IghmP01872 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
IghmP01872 Gm4535-201ENSMUST00000182274 558 ntBASIC14.28□□□□□ -0.12
IghmP01872 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IghmP01872 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IghmP01872 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IghmP01872 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.28□□□□□ -0.12
IghmP01872 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IghmP01872 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IghmP01872 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IghmP01872 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IghmP01872 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IghmP01872 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IghmP01872 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IghmP01872 Gm10355-201ENSMUST00000097146 517 ntBASIC14.28□□□□□ -0.12
IghmP01872 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IghmP01872 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IghmP01872 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IghmP01872 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IghmP01872 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
IghmP01872 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.28□□□□□ -0.12
IghmP01872 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
IghmP01872 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
IghmP01872 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
IghmP01872 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
IghmP01872 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
IghmP01872 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
IghmP01872 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
IghmP01872 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
IghmP01872 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
IghmP01872 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
IghmP01872 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
IghmP01872 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
IghmP01872 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
IghmP01872 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.27□□□□□ -0.12
IghmP01872 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
IghmP01872 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
IghmP01872 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
IghmP01872 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
IghmP01872 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
IghmP01872 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
IghmP01872 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
IghmP01872 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
IghmP01872 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
IghmP01872 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
IghmP01872 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
IghmP01872 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
IghmP01872 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
IghmP01872 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
IghmP01872 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
IghmP01872 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.27□□□□□ -0.13
IghmP01872 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
IghmP01872 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
IghmP01872 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
IghmP01872 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
IghmP01872 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.27□□□□□ -0.13
IghmP01872 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
IghmP01872 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IghmP01872 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IghmP01872 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
IghmP01872 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.26□□□□□ -0.13
IghmP01872 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.26□□□□□ -0.13
IghmP01872 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
IghmP01872 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IghmP01872 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
IghmP01872 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IghmP01872 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
IghmP01872 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
IghmP01872 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IghmP01872 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
IghmP01872 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IghmP01872 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IghmP01872 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.26□□□□□ -0.13
IghmP01872 Gm10499-201ENSMUST00000174094 934 ntBASIC14.26□□□□□ -0.13
IghmP01872 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.26□□□□□ -0.13
IghmP01872 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.26□□□□□ -0.13
IghmP01872 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.26□□□□□ -0.13
IghmP01872 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
IghmP01872 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IghmP01872 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
IghmP01872 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IghmP01872 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
IghmP01872 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
IghmP01872 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IghmP01872 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IghmP01872 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IghmP01872 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IghmP01872 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
IghmP01872 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IghmP01872 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
IghmP01872 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IghmP01872 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 119.3 ms