Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.84□□□□□ -0.19
Pdlim3O70209 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim3O70209 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim3O70209 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim3O70209 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim3O70209 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pdlim3O70209 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.19
Pdlim3O70209 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pdlim3O70209 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pdlim3O70209 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.19
Pdlim3O70209 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim3O70209 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim3O70209 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim3O70209 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim3O70209 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim3O70209 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim3O70209 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim3O70209 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Pdlim3O70209 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.83□□□□□ -0.2
Pdlim3O70209 Gm45328-201ENSMUST00000210942 917 ntBASIC13.83□□□□□ -0.2
Pdlim3O70209 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim3O70209 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim3O70209 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim3O70209 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim3O70209 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pdlim3O70209 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pdlim3O70209 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim3O70209 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim3O70209 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim3O70209 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Pdlim3O70209 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim3O70209 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.83□□□□□ -0.2
Pdlim3O70209 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim3O70209 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pdlim3O70209 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Pdlim3O70209 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim3O70209 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim3O70209 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim3O70209 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.82□□□□□ -0.2
Pdlim3O70209 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim3O70209 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim3O70209 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.82□□□□□ -0.2
Pdlim3O70209 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Pdlim3O70209 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.82□□□□□ -0.2
Pdlim3O70209 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.82□□□□□ -0.2
Pdlim3O70209 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.82□□□□□ -0.2
Pdlim3O70209 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pdlim3O70209 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim3O70209 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.82□□□□□ -0.2
Pdlim3O70209 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim3O70209 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim3O70209 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim3O70209 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim3O70209 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim3O70209 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim3O70209 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim3O70209 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim3O70209 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim3O70209 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pdlim3O70209 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim3O70209 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.82□□□□□ -0.2
Pdlim3O70209 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.82□□□□□ -0.2
Pdlim3O70209 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.82□□□□□ -0.2
Pdlim3O70209 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pdlim3O70209 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim3O70209 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim3O70209 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim3O70209 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim3O70209 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim3O70209 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pdlim3O70209 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.81□□□□□ -0.2
Pdlim3O70209 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Pdlim3O70209 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim3O70209 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim3O70209 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim3O70209 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim3O70209 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pdlim3O70209 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim3O70209 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim3O70209 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.81□□□□□ -0.2
Pdlim3O70209 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.81□□□□□ -0.2
Pdlim3O70209 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim3O70209 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.81□□□□□ -0.2
Pdlim3O70209 Gm6345-202ENSMUST00000180900 204 ntBASIC13.81□□□□□ -0.2
Pdlim3O70209 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.81□□□□□ -0.2
Pdlim3O70209 Gm19164-201ENSMUST00000210667 640 ntBASIC13.81□□□□□ -0.2
Pdlim3O70209 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim3O70209 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim3O70209 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim3O70209 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim3O70209 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim3O70209 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pdlim3O70209 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim3O70209 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim3O70209 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Pdlim3O70209 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim3O70209 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim3O70209 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pdlim3O70209 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.81□□□□□ -0.2
Pdlim3O70209 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms