Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prom1O54990 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Prom1O54990 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prom1O54990 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prom1O54990 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prom1O54990 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Prom1O54990 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prom1O54990 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Prom1O54990 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Prom1O54990 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prom1O54990 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Prom1O54990 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Prom1O54990 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Prom1O54990 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.77■□□□□ 0.28
Prom1O54990 Gm6415-201ENSMUST00000118488 348 ntBASIC16.77■□□□□ 0.28
Prom1O54990 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Prom1O54990 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Prom1O54990 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Prom1O54990 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.77■□□□□ 0.28
Prom1O54990 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Prom1O54990 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Prom1O54990 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Prom1O54990 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Prom1O54990 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Prom1O54990 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Prom1O54990 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.27
Prom1O54990 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Prom1O54990 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Prom1O54990 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.77■□□□□ 0.27
Prom1O54990 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.77■□□□□ 0.27
Prom1O54990 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prom1O54990 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prom1O54990 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prom1O54990 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prom1O54990 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prom1O54990 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Prom1O54990 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Prom1O54990 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.76■□□□□ 0.27
Prom1O54990 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.76■□□□□ 0.27
Prom1O54990 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Prom1O54990 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.76■□□□□ 0.27
Prom1O54990 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prom1O54990 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Prom1O54990 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prom1O54990 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prom1O54990 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prom1O54990 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Prom1O54990 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Prom1O54990 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prom1O54990 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prom1O54990 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Prom1O54990 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prom1O54990 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prom1O54990 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Prom1O54990 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prom1O54990 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prom1O54990 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prom1O54990 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Prom1O54990 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Prom1O54990 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Prom1O54990 Gm13015-201ENSMUST00000118674 204 ntBASIC16.75■□□□□ 0.27
Prom1O54990 Gm2810-201ENSMUST00000118681 990 ntBASIC16.75■□□□□ 0.27
Prom1O54990 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.75■□□□□ 0.27
Prom1O54990 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Prom1O54990 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prom1O54990 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prom1O54990 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Prom1O54990 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.75■□□□□ 0.27
Prom1O54990 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC16.75■□□□□ 0.27
Prom1O54990 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.75■□□□□ 0.27
Prom1O54990 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prom1O54990 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prom1O54990 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prom1O54990 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Prom1O54990 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Prom1O54990 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prom1O54990 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Prom1O54990 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prom1O54990 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prom1O54990 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prom1O54990 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.74■□□□□ 0.27
Prom1O54990 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prom1O54990 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prom1O54990 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prom1O54990 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.74■□□□□ 0.27
Prom1O54990 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.74■□□□□ 0.27
Prom1O54990 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.74■□□□□ 0.27
Prom1O54990 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Prom1O54990 Gm29541-201ENSMUST00000191351 678 ntBASIC16.74■□□□□ 0.27
Prom1O54990 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Prom1O54990 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Prom1O54990 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Prom1O54990 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.74■□□□□ 0.27
Prom1O54990 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prom1O54990 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Prom1O54990 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prom1O54990 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Prom1O54990 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prom1O54990 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prom1O54990 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms