Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.92□□□□□ -0.5
Tnfsf11O35235 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Gm26039-201ENSMUST00000158152 144 ntBASIC11.92□□□□□ -0.5
Tnfsf11O35235 Gm10052-201ENSMUST00000168019 960 ntBASIC11.92□□□□□ -0.5
Tnfsf11O35235 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Gm30025-201ENSMUST00000218555 728 ntBASIC11.92□□□□□ -0.5
Tnfsf11O35235 Gm7729-201ENSMUST00000050143 801 ntBASIC11.92□□□□□ -0.5
Tnfsf11O35235 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf11O35235 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC11.92□□□□□ -0.5
Tnfsf11O35235 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf11O35235 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf11O35235 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf11O35235 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf11O35235 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf11O35235 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Tnfsf11O35235 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf11O35235 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Tnfsf11O35235 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf11O35235 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Tnfsf11O35235 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf11O35235 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf11O35235 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC11.91□□□□□ -0.5
Tnfsf11O35235 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf11O35235 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Tnfsf11O35235 Mir6404-201ENSMUST00000183699 94 ntBASIC11.91□□□□□ -0.5
Tnfsf11O35235 Gm44430-201ENSMUST00000203376 995 ntBASIC11.91□□□□□ -0.5
Tnfsf11O35235 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Tnfsf11O35235 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Tnfsf11O35235 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf11O35235 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf11O35235 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Tnfsf11O35235 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf11O35235 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf11O35235 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf11O35235 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf11O35235 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf11O35235 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf11O35235 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf11O35235 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf11O35235 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf11O35235 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf11O35235 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf11O35235 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Tnfsf11O35235 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.9□□□□□ -0.5
Tnfsf11O35235 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf11O35235 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC11.9□□□□□ -0.5
Tnfsf11O35235 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Tnfsf11O35235 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms