Protein–RNA interactions for Protein: J3QP37

Smim22, MCG1038270, isoform CRA_a, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim22J3QP37 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC15.24■□□□□ 0.03
Smim22J3QP37 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.24■□□□□ 0.03
Smim22J3QP37 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smim22J3QP37 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smim22J3QP37 Mir7070-201ENSMUST00000183657 86 ntBASIC15.24■□□□□ 0.03
Smim22J3QP37 Gm29667-201ENSMUST00000190817 490 ntBASIC15.24■□□□□ 0.03
Smim22J3QP37 Gm44344-201ENSMUST00000200287 129 ntBASIC15.24■□□□□ 0.03
Smim22J3QP37 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC15.24■□□□□ 0.03
Smim22J3QP37 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smim22J3QP37 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smim22J3QP37 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smim22J3QP37 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Smim22J3QP37 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smim22J3QP37 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smim22J3QP37 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smim22J3QP37 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smim22J3QP37 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smim22J3QP37 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smim22J3QP37 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Smim22J3QP37 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smim22J3QP37 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Smim22J3QP37 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Smim22J3QP37 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Smim22J3QP37 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Smim22J3QP37 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim22J3QP37 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Smim22J3QP37 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.23■□□□□ 0.03
Smim22J3QP37 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Smim22J3QP37 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.23■□□□□ 0.03
Smim22J3QP37 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim22J3QP37 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim22J3QP37 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Smim22J3QP37 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim22J3QP37 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC15.23■□□□□ 0.03
Smim22J3QP37 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.23■□□□□ 0.03
Smim22J3QP37 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim22J3QP37 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.23■□□□□ 0.03
Smim22J3QP37 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smim22J3QP37 Gm43138-201ENSMUST00000199123 708 ntBASIC15.23■□□□□ 0.03
Smim22J3QP37 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.23■□□□□ 0.03
Smim22J3QP37 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15.23■□□□□ 0.03
Smim22J3QP37 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.23■□□□□ 0.03
Smim22J3QP37 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Smim22J3QP37 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim22J3QP37 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim22J3QP37 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim22J3QP37 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim22J3QP37 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smim22J3QP37 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim22J3QP37 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim22J3QP37 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smim22J3QP37 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Smim22J3QP37 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim22J3QP37 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim22J3QP37 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim22J3QP37 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim22J3QP37 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.22■□□□□ 0.03
Smim22J3QP37 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smim22J3QP37 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.22■□□□□ 0.03
Smim22J3QP37 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smim22J3QP37 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smim22J3QP37 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Smim22J3QP37 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smim22J3QP37 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.22■□□□□ 0.03
Smim22J3QP37 Gm9385-201ENSMUST00000117563 472 ntBASIC15.22■□□□□ 0.03
Smim22J3QP37 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.22■□□□□ 0.03
Smim22J3QP37 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Smim22J3QP37 Gm8801-201ENSMUST00000173255 1064 ntBASIC15.22■□□□□ 0.03
Smim22J3QP37 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smim22J3QP37 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Smim22J3QP37 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC15.22■□□□□ 0.03
Smim22J3QP37 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smim22J3QP37 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smim22J3QP37 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smim22J3QP37 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smim22J3QP37 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smim22J3QP37 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smim22J3QP37 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smim22J3QP37 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Smim22J3QP37 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smim22J3QP37 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smim22J3QP37 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smim22J3QP37 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Smim22J3QP37 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Smim22J3QP37 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smim22J3QP37 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Smim22J3QP37 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smim22J3QP37 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smim22J3QP37 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smim22J3QP37 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smim22J3QP37 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smim22J3QP37 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.21■□□□□ 0.03
Smim22J3QP37 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.21■□□□□ 0.03
Smim22J3QP37 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smim22J3QP37 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smim22J3QP37 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.21■□□□□ 0.03
Smim22J3QP37 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smim22J3QP37 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smim22J3QP37 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smim22J3QP37 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms