Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TprF6ZDS4 Gm6018-201ENSMUST00000216090 1306 ntBASIC14□□□□□ -0.17
TprF6ZDS4 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TprF6ZDS4 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TprF6ZDS4 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TprF6ZDS4 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14□□□□□ -0.17
TprF6ZDS4 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14□□□□□ -0.17
TprF6ZDS4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TprF6ZDS4 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TprF6ZDS4 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14□□□□□ -0.17
TprF6ZDS4 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TprF6ZDS4 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TprF6ZDS4 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TprF6ZDS4 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TprF6ZDS4 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TprF6ZDS4 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TprF6ZDS4 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TprF6ZDS4 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
TprF6ZDS4 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TprF6ZDS4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TprF6ZDS4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TprF6ZDS4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TprF6ZDS4 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TprF6ZDS4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TprF6ZDS4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14□□□□□ -0.17
TprF6ZDS4 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TprF6ZDS4 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14□□□□□ -0.17
TprF6ZDS4 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14□□□□□ -0.17
TprF6ZDS4 Gm6266-201ENSMUST00000203844 806 ntBASIC14□□□□□ -0.17
TprF6ZDS4 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TprF6ZDS4 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TprF6ZDS4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TprF6ZDS4 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TprF6ZDS4 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TprF6ZDS4 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TprF6ZDS4 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TprF6ZDS4 Gm44832-201ENSMUST00000208849 2303 ntBASIC13.99□□□□□ -0.17
TprF6ZDS4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TprF6ZDS4 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TprF6ZDS4 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TprF6ZDS4 Gm3786-201ENSMUST00000202659 378 ntBASIC13.99□□□□□ -0.17
TprF6ZDS4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TprF6ZDS4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TprF6ZDS4 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TprF6ZDS4 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TprF6ZDS4 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TprF6ZDS4 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TprF6ZDS4 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TprF6ZDS4 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TprF6ZDS4 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TprF6ZDS4 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.99□□□□□ -0.17
TprF6ZDS4 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.99□□□□□ -0.17
TprF6ZDS4 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.99□□□□□ -0.17
TprF6ZDS4 Gm8602-201ENSMUST00000184045 607 ntBASIC13.99□□□□□ -0.17
TprF6ZDS4 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TprF6ZDS4 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.99□□□□□ -0.17
TprF6ZDS4 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.99□□□□□ -0.17
TprF6ZDS4 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.99□□□□□ -0.17
TprF6ZDS4 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TprF6ZDS4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC13.98□□□□□ -0.17
TprF6ZDS4 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TprF6ZDS4 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.98□□□□□ -0.17
TprF6ZDS4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TprF6ZDS4 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TprF6ZDS4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.98□□□□□ -0.17
TprF6ZDS4 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TprF6ZDS4 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TprF6ZDS4 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TprF6ZDS4 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TprF6ZDS4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TprF6ZDS4 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TprF6ZDS4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
TprF6ZDS4 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TprF6ZDS4 Gm2810-201ENSMUST00000118681 990 ntBASIC13.98□□□□□ -0.17
TprF6ZDS4 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TprF6ZDS4 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.98□□□□□ -0.17
TprF6ZDS4 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TprF6ZDS4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TprF6ZDS4 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TprF6ZDS4 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TprF6ZDS4 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TprF6ZDS4 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TprF6ZDS4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TprF6ZDS4 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TprF6ZDS4 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TprF6ZDS4 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TprF6ZDS4 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TprF6ZDS4 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TprF6ZDS4 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TprF6ZDS4 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.98□□□□□ -0.17
TprF6ZDS4 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.98□□□□□ -0.17
TprF6ZDS4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TprF6ZDS4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TprF6ZDS4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TprF6ZDS4 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TprF6ZDS4 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
TprF6ZDS4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TprF6ZDS4 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TprF6ZDS4 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TprF6ZDS4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms