Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4lE9Q2N0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4lE9Q2N0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4lE9Q2N0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4lE9Q2N0 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cpsf4lE9Q2N0 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Cpsf4lE9Q2N0 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4lE9Q2N0 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4lE9Q2N0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4lE9Q2N0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4lE9Q2N0 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4lE9Q2N0 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Cpsf4lE9Q2N0 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cpsf4lE9Q2N0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4lE9Q2N0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.9□□□□□ -0.34
Cpsf4lE9Q2N0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4lE9Q2N0 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.9□□□□□ -0.34
Cpsf4lE9Q2N0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4lE9Q2N0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.9□□□□□ -0.34
Cpsf4lE9Q2N0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4lE9Q2N0 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4lE9Q2N0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4lE9Q2N0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4lE9Q2N0 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4lE9Q2N0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4lE9Q2N0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4lE9Q2N0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4lE9Q2N0 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4lE9Q2N0 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4lE9Q2N0 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4lE9Q2N0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cpsf4lE9Q2N0 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cpsf4lE9Q2N0 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cpsf4lE9Q2N0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cpsf4lE9Q2N0 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
Cpsf4lE9Q2N0 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cpsf4lE9Q2N0 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Cpsf4lE9Q2N0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4lE9Q2N0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4lE9Q2N0 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4lE9Q2N0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cpsf4lE9Q2N0 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4lE9Q2N0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4lE9Q2N0 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4lE9Q2N0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4lE9Q2N0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4lE9Q2N0 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4lE9Q2N0 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.88□□□□□ -0.35
Cpsf4lE9Q2N0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.88□□□□□ -0.35
Cpsf4lE9Q2N0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Cpsf4lE9Q2N0 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4lE9Q2N0 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4lE9Q2N0 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4lE9Q2N0 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4lE9Q2N0 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4lE9Q2N0 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4lE9Q2N0 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4lE9Q2N0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4lE9Q2N0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.88□□□□□ -0.35
Cpsf4lE9Q2N0 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cpsf4lE9Q2N0 Gm27300-201ENSMUST00000184085 97 ntBASIC12.88□□□□□ -0.35
Cpsf4lE9Q2N0 Gm27335-201ENSMUST00000184758 97 ntBASIC12.88□□□□□ -0.35
Cpsf4lE9Q2N0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.88□□□□□ -0.35
Cpsf4lE9Q2N0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.88□□□□□ -0.35
Cpsf4lE9Q2N0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms