Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav12-1A0N8R1 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Gm6659-201ENSMUST00000174752 547 ntBASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Gm25745-201ENSMUST00000174945 133 ntBASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.74□□□□□ -0.37
Trav12-1A0N8R1 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-1A0N8R1 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-1A0N8R1 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-1A0N8R1 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-1A0N8R1 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-1A0N8R1 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-1A0N8R1 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-1A0N8R1 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav12-1A0N8R1 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-1A0N8R1 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav12-1A0N8R1 Grk6-207ENSMUST00000225925 2769 ntBASIC12.73□□□□□ -0.37
Trav12-1A0N8R1 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-1A0N8R1 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav12-1A0N8R1 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-1A0N8R1 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-1A0N8R1 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav12-1A0N8R1 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav12-1A0N8R1 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.73□□□□□ -0.37
Trav12-1A0N8R1 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-1A0N8R1 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Trav12-1A0N8R1 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.73□□□□□ -0.37
Trav12-1A0N8R1 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav12-1A0N8R1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-1A0N8R1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-1A0N8R1 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-1A0N8R1 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav12-1A0N8R1 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-1A0N8R1 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-1A0N8R1 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-1A0N8R1 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-1A0N8R1 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav12-1A0N8R1 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Gm4459-201ENSMUST00000118750 468 ntBASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Gm12134-201ENSMUST00000122109 520 ntBASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav12-1A0N8R1 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms