Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-1A0N8R0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav12d-1A0N8R0 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-1A0N8R0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-1A0N8R0 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-1A0N8R0 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-1A0N8R0 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav12d-1A0N8R0 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-1A0N8R0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-1A0N8R0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-1A0N8R0 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-1A0N8R0 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav12d-1A0N8R0 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-1A0N8R0 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
Trav12d-1A0N8R0 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
Trav12d-1A0N8R0 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
Trav12d-1A0N8R0 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-1A0N8R0 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-1A0N8R0 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-1A0N8R0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-1A0N8R0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav12d-1A0N8R0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-1A0N8R0 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-1A0N8R0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-1A0N8R0 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-1A0N8R0 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-1A0N8R0 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-1A0N8R0 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav12d-1A0N8R0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav12d-1A0N8R0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Trav12d-1A0N8R0 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.27□□□□□ -0.44
Trav12d-1A0N8R0 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav12d-1A0N8R0 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav12d-1A0N8R0 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav12d-1A0N8R0 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav12d-1A0N8R0 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav12d-1A0N8R0 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav12d-1A0N8R0 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav12d-1A0N8R0 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav12d-1A0N8R0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav12d-1A0N8R0 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav12d-1A0N8R0 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-1A0N8R0 Gm15794-201ENSMUST00000120182 631 ntBASIC12.27□□□□□ -0.45
Trav12d-1A0N8R0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-1A0N8R0 Gm6345-202ENSMUST00000180900 204 ntBASIC12.27□□□□□ -0.45
Trav12d-1A0N8R0 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.27□□□□□ -0.45
Trav12d-1A0N8R0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-1A0N8R0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-1A0N8R0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-1A0N8R0 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav12d-1A0N8R0 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-1A0N8R0 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav12d-1A0N8R0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-1A0N8R0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-1A0N8R0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-1A0N8R0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trav12d-1A0N8R0 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-1A0N8R0 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Trav12d-1A0N8R0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-1A0N8R0 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-1A0N8R0 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-1A0N8R0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-1A0N8R0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-1A0N8R0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav12d-1A0N8R0 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Gm8344-201ENSMUST00000119813 856 ntBASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Gm44454-201ENSMUST00000198541 138 ntBASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav12d-1A0N8R0 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms