Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Gm6257-201ENSMUST00000163864 910 ntBASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Gm5364-201ENSMUST00000216789 889 ntBASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Gm8784-201ENSMUST00000222096 1435 ntBASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Ntrk2-205ENSMUST00000224402 2284 ntBASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trav13n-1A0A0G2JEU8 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC11.06□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13n-1A0A0G2JEU8 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.06□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav13n-1A0A0G2JEU8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms