Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.12□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.12□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Gm10459-201ENSMUST00000202708 1155 ntBASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Gm10819-201ENSMUST00000099988 561 ntBASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Trav9n-2A0A0G2JDP3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Tfap2a-203ENSMUST00000223869 2037 ntBASIC11.1□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.1□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC11.1□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-2A0A0G2JDP3 BC037039-201ENSMUST00000192003 2205 ntBASIC11.09□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms