Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trbv3A0A0A6YYE2 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trbv3A0A0A6YYE2 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv3A0A0A6YYE2 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv3A0A0A6YYE2 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trbv3A0A0A6YYE2 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv3A0A0A6YYE2 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv3A0A0A6YYE2 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv3A0A0A6YYE2 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv3A0A0A6YYE2 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv3A0A0A6YYE2 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Gm2274-201ENSMUST00000184539 609 ntBASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 AC154649.1-201ENSMUST00000227392 384 ntBASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trbv3A0A0A6YYE2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.74□□□□□ -0.53
Trbv3A0A0A6YYE2 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms