Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav6d-5A0A075B6B9 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav6d-5A0A075B6B9 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-5A0A075B6B9 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-5A0A075B6B9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-5A0A075B6B9 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-5A0A075B6B9 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-5A0A075B6B9 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav6d-5A0A075B6B9 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-5A0A075B6B9 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-5A0A075B6B9 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-5A0A075B6B9 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-5A0A075B6B9 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm13559-201ENSMUST00000120476 863 ntBASIC12.31□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-5A0A075B6B9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav6d-5A0A075B6B9 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.31□□□□□ -0.44
Trav6d-5A0A075B6B9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-5A0A075B6B9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-5A0A075B6B9 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trav6d-5A0A075B6B9 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-5A0A075B6B9 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trav6d-5A0A075B6B9 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav6d-5A0A075B6B9 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-5A0A075B6B9 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-5A0A075B6B9 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav6d-5A0A075B6B9 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-5A0A075B6B9 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-5A0A075B6B9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav6d-5A0A075B6B9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav6d-5A0A075B6B9 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav6d-5A0A075B6B9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm8825-201ENSMUST00000182565 998 ntBASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm4518-201ENSMUST00000182638 718 ntBASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav6d-5A0A075B6B9 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav6d-5A0A075B6B9 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms