Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav13-2A0A075B649 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav13-2A0A075B649 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Trav13-2A0A075B649 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Trav13-2A0A075B649 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav13-2A0A075B649 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav13-2A0A075B649 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Trav13-2A0A075B649 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Trav13-2A0A075B649 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav13-2A0A075B649 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Gm27389-201ENSMUST00000183622 195 ntBASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Gm37722-201ENSMUST00000193757 208 ntBASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav13-2A0A075B649 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13-2A0A075B649 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trav13-2A0A075B649 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13-2A0A075B649 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13-2A0A075B649 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav13-2A0A075B649 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13-2A0A075B649 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trav13-2A0A075B649 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13-2A0A075B649 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13-2A0A075B649 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13-2A0A075B649 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13-2A0A075B649 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13-2A0A075B649 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13-2A0A075B649 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC10.26□□□□□ -0.77
Trav13-2A0A075B649 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13-2A0A075B649 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13-2A0A075B649 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13-2A0A075B649 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13-2A0A075B649 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13-2A0A075B649 Gm44430-201ENSMUST00000203376 995 ntBASIC10.26□□□□□ -0.77
Trav13-2A0A075B649 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav13-2A0A075B649 Gm18959-201ENSMUST00000208954 655 ntBASIC10.26□□□□□ -0.77
Trav13-2A0A075B649 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Trav13-2A0A075B649 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13-2A0A075B649 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13-2A0A075B649 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13-2A0A075B649 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav13-2A0A075B649 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms