Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav8-1A0A075B641 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trav8-1A0A075B641 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav8-1A0A075B641 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav8-1A0A075B641 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC10.98□□□□□ -0.65
Trav8-1A0A075B641 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav8-1A0A075B641 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav8-1A0A075B641 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav8-1A0A075B641 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Trav8-1A0A075B641 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav8-1A0A075B641 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav8-1A0A075B641 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav8-1A0A075B641 Gm12134-201ENSMUST00000122109 520 ntBASIC10.98□□□□□ -0.65
Trav8-1A0A075B641 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC10.98□□□□□ -0.65
Trav8-1A0A075B641 Gm9731-201ENSMUST00000209480 747 ntBASIC10.98□□□□□ -0.65
Trav8-1A0A075B641 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav8-1A0A075B641 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav8-1A0A075B641 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav8-1A0A075B641 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav8-1A0A075B641 Nrn1-203ENSMUST00000223611 1443 ntBASIC10.98□□□□□ -0.65
Trav8-1A0A075B641 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav8-1A0A075B641 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC10.98□□□□□ -0.65
Trav8-1A0A075B641 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav8-1A0A075B641 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav8-1A0A075B641 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav8-1A0A075B641 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trav8-1A0A075B641 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trav8-1A0A075B641 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Gm11839-201ENSMUST00000120647 1953 ntBASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trav8-1A0A075B641 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav8-1A0A075B641 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trav8-1A0A075B641 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav8-1A0A075B641 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav8-1A0A075B641 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav8-1A0A075B641 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav8-1A0A075B641 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav8-1A0A075B641 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav8-1A0A075B641 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Trav8-1A0A075B641 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav8-1A0A075B641 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav8-1A0A075B641 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav8-1A0A075B641 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav8-1A0A075B641 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav8-1A0A075B641 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC10.96□□□□□ -0.65
Trav8-1A0A075B641 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav8-1A0A075B641 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC10.96□□□□□ -0.65
Trav8-1A0A075B641 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav8-1A0A075B641 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC10.96□□□□□ -0.65
Trav8-1A0A075B641 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC10.96□□□□□ -0.65
Trav8-1A0A075B641 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav8-1A0A075B641 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav8-1A0A075B641 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav8-1A0A075B641 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms