Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Gm23547-201ENSMUST00000158210 271 ntBASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav7n-4A0A075B620 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Gm9889-202ENSMUST00000206983 1577 ntBASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Prkcz2-201ENSMUST00000206136 1756 ntBASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav7n-4A0A075B620 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Gm16042-201ENSMUST00000204813 1247 ntBASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav7n-4A0A075B620 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms