Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.01□□□□□ -0.33
Col13a1Q9R1N9 Gm5866-201ENSMUST00000177881 973 ntBASIC13.01□□□□□ -0.33
Col13a1Q9R1N9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.01□□□□□ -0.33
Col13a1Q9R1N9 Gm7787-201ENSMUST00000216858 688 ntBASIC13.01□□□□□ -0.33
Col13a1Q9R1N9 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col13a1Q9R1N9 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col13a1Q9R1N9 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Col13a1Q9R1N9 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Col13a1Q9R1N9 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Col13a1Q9R1N9 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col13a1Q9R1N9 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Col13a1Q9R1N9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col13a1Q9R1N9 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col13a1Q9R1N9 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col13a1Q9R1N9 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col13a1Q9R1N9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Col13a1Q9R1N9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col13a1Q9R1N9 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col13a1Q9R1N9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col13a1Q9R1N9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col13a1Q9R1N9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.01□□□□□ -0.33
Col13a1Q9R1N9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13□□□□□ -0.33
Col13a1Q9R1N9 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Mir449b-201ENSMUST00000104833 80 ntBASIC13□□□□□ -0.33
Col13a1Q9R1N9 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Gm27437-201ENSMUST00000183429 107 ntBASIC13□□□□□ -0.33
Col13a1Q9R1N9 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Gm45612-201ENSMUST00000211320 160 ntBASIC13□□□□□ -0.33
Col13a1Q9R1N9 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col13a1Q9R1N9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Gm18889-201ENSMUST00000174284 929 ntBASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Gm27301-201ENSMUST00000184012 127 ntBASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Gm43125-201ENSMUST00000201724 730 ntBASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Col13a1Q9R1N9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms