Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Chaf1bQ9D0N7 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Chaf1bQ9D0N7 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1bQ9D0N7 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1bQ9D0N7 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1bQ9D0N7 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1bQ9D0N7 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1bQ9D0N7 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1bQ9D0N7 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1bQ9D0N7 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1bQ9D0N7 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1bQ9D0N7 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1bQ9D0N7 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1bQ9D0N7 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1bQ9D0N7 Gm11355-201ENSMUST00000121120 306 ntBASIC14.38□□□□□ -0.11
Chaf1bQ9D0N7 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1bQ9D0N7 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1bQ9D0N7 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1bQ9D0N7 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1bQ9D0N7 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1bQ9D0N7 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1bQ9D0N7 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1bQ9D0N7 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Chaf1bQ9D0N7 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Chaf1bQ9D0N7 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chaf1bQ9D0N7 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Chaf1bQ9D0N7 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1bQ9D0N7 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1bQ9D0N7 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1bQ9D0N7 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Chaf1bQ9D0N7 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1bQ9D0N7 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1bQ9D0N7 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1bQ9D0N7 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Chaf1bQ9D0N7 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1bQ9D0N7 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1bQ9D0N7 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Chaf1bQ9D0N7 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1bQ9D0N7 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1bQ9D0N7 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.37□□□□□ -0.11
Chaf1bQ9D0N7 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Chaf1bQ9D0N7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1bQ9D0N7 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1bQ9D0N7 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Chaf1bQ9D0N7 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Chaf1bQ9D0N7 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1bQ9D0N7 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Chaf1bQ9D0N7 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1bQ9D0N7 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1bQ9D0N7 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Chaf1bQ9D0N7 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1bQ9D0N7 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.37□□□□□ -0.11
Chaf1bQ9D0N7 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1bQ9D0N7 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chaf1bQ9D0N7 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1bQ9D0N7 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1bQ9D0N7 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1bQ9D0N7 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1bQ9D0N7 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1bQ9D0N7 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Chaf1bQ9D0N7 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.36□□□□□ -0.11
Chaf1bQ9D0N7 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Chaf1bQ9D0N7 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1bQ9D0N7 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Chaf1bQ9D0N7 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1bQ9D0N7 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1bQ9D0N7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1bQ9D0N7 Gm22697-201ENSMUST00000175194 63 ntBASIC14.36□□□□□ -0.11
Chaf1bQ9D0N7 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Chaf1bQ9D0N7 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.36□□□□□ -0.11
Chaf1bQ9D0N7 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1bQ9D0N7 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1bQ9D0N7 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1bQ9D0N7 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1bQ9D0N7 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1bQ9D0N7 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1bQ9D0N7 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1bQ9D0N7 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1bQ9D0N7 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms