Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim13Q9CYB0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim13Q9CYB0 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim13Q9CYB0 Gm27389-201ENSMUST00000183622 195 ntBASIC14.15□□□□□ -0.14
Trim13Q9CYB0 Gm7889-201ENSMUST00000185591 958 ntBASIC14.15□□□□□ -0.14
Trim13Q9CYB0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.15□□□□□ -0.14
Trim13Q9CYB0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim13Q9CYB0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim13Q9CYB0 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim13Q9CYB0 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trim13Q9CYB0 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim13Q9CYB0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim13Q9CYB0 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim13Q9CYB0 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
Trim13Q9CYB0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim13Q9CYB0 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim13Q9CYB0 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim13Q9CYB0 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.15□□□□□ -0.14
Trim13Q9CYB0 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim13Q9CYB0 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim13Q9CYB0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.15□□□□□ -0.15
Trim13Q9CYB0 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Gm18959-201ENSMUST00000208954 655 ntBASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.14□□□□□ -0.15
Trim13Q9CYB0 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim13Q9CYB0 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.13□□□□□ -0.15
Trim13Q9CYB0 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim13Q9CYB0 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim13Q9CYB0 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim13Q9CYB0 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trim13Q9CYB0 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim13Q9CYB0 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms