Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rtn4Q99P72 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rtn4Q99P72 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rtn4Q99P72 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19.58■□□□□ 0.73
Rtn4Q99P72 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
Rtn4Q99P72 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rtn4Q99P72 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rtn4Q99P72 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rtn4Q99P72 Gm15467-201ENSMUST00000120582 445 ntBASIC19.58■□□□□ 0.72
Rtn4Q99P72 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rtn4Q99P72 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Rtn4Q99P72 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC19.58■□□□□ 0.72
Rtn4Q99P72 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC19.58■□□□□ 0.72
Rtn4Q99P72 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rtn4Q99P72 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rtn4Q99P72 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rtn4Q99P72 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Rtn4Q99P72 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rtn4Q99P72 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rtn4Q99P72 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rtn4Q99P72 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
Rtn4Q99P72 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.57■□□□□ 0.72
Rtn4Q99P72 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn4Q99P72 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn4Q99P72 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn4Q99P72 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn4Q99P72 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn4Q99P72 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Rtn4Q99P72 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Rtn4Q99P72 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn4Q99P72 Gm649-201ENSMUST00000117284 1054 ntBASIC19.57■□□□□ 0.72
Rtn4Q99P72 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC19.57■□□□□ 0.72
Rtn4Q99P72 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Rtn4Q99P72 Gm43935-201ENSMUST00000203569 1050 ntBASIC19.57■□□□□ 0.72
Rtn4Q99P72 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC19.57■□□□□ 0.72
Rtn4Q99P72 Gm9520-201ENSMUST00000209460 1253 ntBASIC19.57■□□□□ 0.72
Rtn4Q99P72 AC159106.1-201ENSMUST00000224421 690 ntBASIC19.57■□□□□ 0.72
Rtn4Q99P72 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn4Q99P72 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn4Q99P72 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn4Q99P72 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Rtn4Q99P72 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn4Q99P72 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn4Q99P72 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn4Q99P72 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn4Q99P72 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn4Q99P72 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Rtn4Q99P72 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn4Q99P72 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn4Q99P72 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn4Q99P72 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn4Q99P72 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn4Q99P72 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn4Q99P72 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn4Q99P72 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn4Q99P72 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Rtn4Q99P72 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Rtn4Q99P72 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.56■□□□□ 0.72
Rtn4Q99P72 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC19.56■□□□□ 0.72
Rtn4Q99P72 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Rtn4Q99P72 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn4Q99P72 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn4Q99P72 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Rtn4Q99P72 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC19.56■□□□□ 0.72
Rtn4Q99P72 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn4Q99P72 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn4Q99P72 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn4Q99P72 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Rtn4Q99P72 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC19.56■□□□□ 0.72
Rtn4Q99P72 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn4Q99P72 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn4Q99P72 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Rtn4Q99P72 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn4Q99P72 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn4Q99P72 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn4Q99P72 AC122901.1-201ENSMUST00000214203 1790 ntBASIC19.56■□□□□ 0.72
Rtn4Q99P72 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Rtn4Q99P72 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
Rtn4Q99P72 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Rtn4Q99P72 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn4Q99P72 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn4Q99P72 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn4Q99P72 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC19.56■□□□□ 0.72
Rtn4Q99P72 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rtn4Q99P72 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rtn4Q99P72 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rtn4Q99P72 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rtn4Q99P72 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rtn4Q99P72 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rtn4Q99P72 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Rtn4Q99P72 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rtn4Q99P72 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rtn4Q99P72 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rtn4Q99P72 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rtn4Q99P72 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.55■□□□□ 0.72
Rtn4Q99P72 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC19.55■□□□□ 0.72
Rtn4Q99P72 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rtn4Q99P72 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC19.55■□□□□ 0.72
Rtn4Q99P72 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Rtn4Q99P72 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms