Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.39□□□□□ -0.27
Scrt1Q99M85 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scrt1Q99M85 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scrt1Q99M85 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Scrt1Q99M85 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scrt1Q99M85 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scrt1Q99M85 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.39□□□□□ -0.27
Scrt1Q99M85 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.39□□□□□ -0.27
Scrt1Q99M85 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Scrt1Q99M85 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.39□□□□□ -0.27
Scrt1Q99M85 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.39□□□□□ -0.27
Scrt1Q99M85 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scrt1Q99M85 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scrt1Q99M85 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Scrt1Q99M85 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scrt1Q99M85 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scrt1Q99M85 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.39□□□□□ -0.27
Scrt1Q99M85 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scrt1Q99M85 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scrt1Q99M85 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scrt1Q99M85 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scrt1Q99M85 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scrt1Q99M85 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scrt1Q99M85 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scrt1Q99M85 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scrt1Q99M85 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scrt1Q99M85 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scrt1Q99M85 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scrt1Q99M85 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scrt1Q99M85 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scrt1Q99M85 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.38□□□□□ -0.27
Scrt1Q99M85 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Scrt1Q99M85 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scrt1Q99M85 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Scrt1Q99M85 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scrt1Q99M85 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Scrt1Q99M85 Gm25948-201ENSMUST00000175334 112 ntBASIC13.38□□□□□ -0.27
Scrt1Q99M85 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.38□□□□□ -0.27
Scrt1Q99M85 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.38□□□□□ -0.27
Scrt1Q99M85 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scrt1Q99M85 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.38□□□□□ -0.27
Scrt1Q99M85 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.38□□□□□ -0.27
Scrt1Q99M85 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scrt1Q99M85 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scrt1Q99M85 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scrt1Q99M85 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scrt1Q99M85 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scrt1Q99M85 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Scrt1Q99M85 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scrt1Q99M85 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scrt1Q99M85 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scrt1Q99M85 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.38□□□□□ -0.27
Scrt1Q99M85 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scrt1Q99M85 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scrt1Q99M85 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scrt1Q99M85 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Gm11745-201ENSMUST00000121669 448 ntBASIC13.37□□□□□ -0.27
Scrt1Q99M85 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scrt1Q99M85 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.37□□□□□ -0.27
Scrt1Q99M85 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.37□□□□□ -0.27
Scrt1Q99M85 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scrt1Q99M85 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scrt1Q99M85 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scrt1Q99M85 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scrt1Q99M85 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.36□□□□□ -0.27
Scrt1Q99M85 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scrt1Q99M85 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scrt1Q99M85 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scrt1Q99M85 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms