Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgc5Q91XW9 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Pcdhgc5Q91XW9 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgc5Q91XW9 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgc5Q91XW9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Pcdhgc5Q91XW9 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.41■□□□□ 0.38
Pcdhgc5Q91XW9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhgc5Q91XW9 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Pcdhgc5Q91XW9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgc5Q91XW9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgc5Q91XW9 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgc5Q91XW9 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgc5Q91XW9 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgc5Q91XW9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgc5Q91XW9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgc5Q91XW9 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgc5Q91XW9 Gm27494-201ENSMUST00000184735 189 ntBASIC17.4■□□□□ 0.38
Pcdhgc5Q91XW9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Pcdhgc5Q91XW9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgc5Q91XW9 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC17.4■□□□□ 0.38
Pcdhgc5Q91XW9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgc5Q91XW9 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgc5Q91XW9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgc5Q91XW9 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pcdhgc5Q91XW9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgc5Q91XW9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgc5Q91XW9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgc5Q91XW9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.4■□□□□ 0.38
Pcdhgc5Q91XW9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcdhgc5Q91XW9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC17.4■□□□□ 0.38
Pcdhgc5Q91XW9 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pcdhgc5Q91XW9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcdhgc5Q91XW9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgc5Q91XW9 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgc5Q91XW9 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgc5Q91XW9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgc5Q91XW9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgc5Q91XW9 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhgc5Q91XW9 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgc5Q91XW9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.39■□□□□ 0.37
Pcdhgc5Q91XW9 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgc5Q91XW9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgc5Q91XW9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhgc5Q91XW9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Pcdhgc5Q91XW9 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgc5Q91XW9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgc5Q91XW9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgc5Q91XW9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdhgc5Q91XW9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Pcdhgc5Q91XW9 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pcdhgc5Q91XW9 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgc5Q91XW9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgc5Q91XW9 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgc5Q91XW9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhgc5Q91XW9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhgc5Q91XW9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgc5Q91XW9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgc5Q91XW9 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhgc5Q91XW9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhgc5Q91XW9 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgc5Q91XW9 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Pcdhgc5Q91XW9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.38■□□□□ 0.37
Pcdhgc5Q91XW9 Gm20949-201ENSMUST00000206478 952 ntBASIC17.38■□□□□ 0.37
Pcdhgc5Q91XW9 Gm45747-201ENSMUST00000212203 999 ntBASIC17.38■□□□□ 0.37
Pcdhgc5Q91XW9 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgc5Q91XW9 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhgc5Q91XW9 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pcdhgc5Q91XW9 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Gm13365-201ENSMUST00000121188 973 ntBASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Gm44335-201ENSMUST00000196879 141 ntBASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Gm9682-201ENSMUST00000197505 556 ntBASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Gm44297-201ENSMUST00000198304 141 ntBASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Gm44346-201ENSMUST00000198851 141 ntBASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdhgc5Q91XW9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms