Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SfpqQ8VIJ6 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SfpqQ8VIJ6 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SfpqQ8VIJ6 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SfpqQ8VIJ6 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SfpqQ8VIJ6 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SfpqQ8VIJ6 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
SfpqQ8VIJ6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
SfpqQ8VIJ6 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SfpqQ8VIJ6 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SfpqQ8VIJ6 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SfpqQ8VIJ6 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
SfpqQ8VIJ6 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SfpqQ8VIJ6 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SfpqQ8VIJ6 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SfpqQ8VIJ6 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.14■□□□□ 0.17
SfpqQ8VIJ6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SfpqQ8VIJ6 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SfpqQ8VIJ6 Mir6982-201ENSMUST00000184354 68 ntBASIC16.14■□□□□ 0.17
SfpqQ8VIJ6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SfpqQ8VIJ6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
SfpqQ8VIJ6 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SfpqQ8VIJ6 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SfpqQ8VIJ6 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SfpqQ8VIJ6 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SfpqQ8VIJ6 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SfpqQ8VIJ6 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
SfpqQ8VIJ6 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SfpqQ8VIJ6 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SfpqQ8VIJ6 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.14■□□□□ 0.17
SfpqQ8VIJ6 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SfpqQ8VIJ6 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
SfpqQ8VIJ6 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.13■□□□□ 0.17
SfpqQ8VIJ6 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SfpqQ8VIJ6 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SfpqQ8VIJ6 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SfpqQ8VIJ6 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SfpqQ8VIJ6 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SfpqQ8VIJ6 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SfpqQ8VIJ6 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.13■□□□□ 0.17
SfpqQ8VIJ6 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SfpqQ8VIJ6 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SfpqQ8VIJ6 Gm6345-202ENSMUST00000180900 204 ntBASIC16.13■□□□□ 0.17
SfpqQ8VIJ6 Gm9172-201ENSMUST00000212092 954 ntBASIC16.13■□□□□ 0.17
SfpqQ8VIJ6 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SfpqQ8VIJ6 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SfpqQ8VIJ6 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SfpqQ8VIJ6 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SfpqQ8VIJ6 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SfpqQ8VIJ6 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SfpqQ8VIJ6 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
SfpqQ8VIJ6 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SfpqQ8VIJ6 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SfpqQ8VIJ6 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SfpqQ8VIJ6 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SfpqQ8VIJ6 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SfpqQ8VIJ6 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SfpqQ8VIJ6 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SfpqQ8VIJ6 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SfpqQ8VIJ6 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SfpqQ8VIJ6 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SfpqQ8VIJ6 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SfpqQ8VIJ6 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
SfpqQ8VIJ6 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.12■□□□□ 0.17
SfpqQ8VIJ6 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SfpqQ8VIJ6 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SfpqQ8VIJ6 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SfpqQ8VIJ6 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SfpqQ8VIJ6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SfpqQ8VIJ6 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.12■□□□□ 0.17
SfpqQ8VIJ6 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SfpqQ8VIJ6 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SfpqQ8VIJ6 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.12■□□□□ 0.17
SfpqQ8VIJ6 Gm19164-201ENSMUST00000210667 640 ntBASIC16.12■□□□□ 0.17
SfpqQ8VIJ6 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SfpqQ8VIJ6 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.12■□□□□ 0.17
SfpqQ8VIJ6 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SfpqQ8VIJ6 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
SfpqQ8VIJ6 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SfpqQ8VIJ6 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.12■□□□□ 0.17
SfpqQ8VIJ6 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SfpqQ8VIJ6 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SfpqQ8VIJ6 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SfpqQ8VIJ6 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SfpqQ8VIJ6 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
SfpqQ8VIJ6 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SfpqQ8VIJ6 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SfpqQ8VIJ6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.11■□□□□ 0.17
SfpqQ8VIJ6 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SfpqQ8VIJ6 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SfpqQ8VIJ6 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SfpqQ8VIJ6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.11■□□□□ 0.17
SfpqQ8VIJ6 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
SfpqQ8VIJ6 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SfpqQ8VIJ6 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SfpqQ8VIJ6 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SfpqQ8VIJ6 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SfpqQ8VIJ6 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SfpqQ8VIJ6 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SfpqQ8VIJ6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms