Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rpa1Q8VEE4 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rpa1Q8VEE4 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rpa1Q8VEE4 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rpa1Q8VEE4 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Rpa1Q8VEE4 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rpa1Q8VEE4 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rpa1Q8VEE4 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rpa1Q8VEE4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Rpa1Q8VEE4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.43■□□□□ 0.06
Rpa1Q8VEE4 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Rpa1Q8VEE4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rpa1Q8VEE4 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rpa1Q8VEE4 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.43■□□□□ 0.06
Rpa1Q8VEE4 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rpa1Q8VEE4 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rpa1Q8VEE4 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rpa1Q8VEE4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rpa1Q8VEE4 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rpa1Q8VEE4 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rpa1Q8VEE4 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rpa1Q8VEE4 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rpa1Q8VEE4 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.43■□□□□ 0.06
Rpa1Q8VEE4 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rpa1Q8VEE4 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rpa1Q8VEE4 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rpa1Q8VEE4 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.43■□□□□ 0.06
Rpa1Q8VEE4 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rpa1Q8VEE4 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Rpa1Q8VEE4 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpa1Q8VEE4 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpa1Q8VEE4 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpa1Q8VEE4 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpa1Q8VEE4 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.42■□□□□ 0.06
Rpa1Q8VEE4 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpa1Q8VEE4 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.42■□□□□ 0.06
Rpa1Q8VEE4 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpa1Q8VEE4 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.42■□□□□ 0.06
Rpa1Q8VEE4 Gm13436-201ENSMUST00000120418 567 ntBASIC15.42■□□□□ 0.06
Rpa1Q8VEE4 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
Rpa1Q8VEE4 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpa1Q8VEE4 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Rpa1Q8VEE4 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpa1Q8VEE4 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.42■□□□□ 0.06
Rpa1Q8VEE4 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rpa1Q8VEE4 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpa1Q8VEE4 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
Rpa1Q8VEE4 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpa1Q8VEE4 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.41■□□□□ 0.06
Rpa1Q8VEE4 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpa1Q8VEE4 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Rpa1Q8VEE4 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpa1Q8VEE4 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rpa1Q8VEE4 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpa1Q8VEE4 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpa1Q8VEE4 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpa1Q8VEE4 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.41■□□□□ 0.06
Rpa1Q8VEE4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpa1Q8VEE4 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpa1Q8VEE4 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpa1Q8VEE4 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rpa1Q8VEE4 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rpa1Q8VEE4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rpa1Q8VEE4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.41■□□□□ 0.06
Rpa1Q8VEE4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rpa1Q8VEE4 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpa1Q8VEE4 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpa1Q8VEE4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpa1Q8VEE4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Rpa1Q8VEE4 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rpa1Q8VEE4 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rpa1Q8VEE4 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rpa1Q8VEE4 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpa1Q8VEE4 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpa1Q8VEE4 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Rpa1Q8VEE4 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpa1Q8VEE4 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpa1Q8VEE4 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpa1Q8VEE4 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpa1Q8VEE4 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpa1Q8VEE4 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Rpa1Q8VEE4 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rpa1Q8VEE4 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpa1Q8VEE4 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rpa1Q8VEE4 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpa1Q8VEE4 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpa1Q8VEE4 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Rpa1Q8VEE4 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpa1Q8VEE4 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.4■□□□□ 0.06
Rpa1Q8VEE4 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.4■□□□□ 0.06
Rpa1Q8VEE4 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpa1Q8VEE4 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Rpa1Q8VEE4 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Rpa1Q8VEE4 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.4■□□□□ 0.06
Rpa1Q8VEE4 Gm13559-201ENSMUST00000120476 863 ntBASIC15.4■□□□□ 0.06
Rpa1Q8VEE4 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rpa1Q8VEE4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rpa1Q8VEE4 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC15.4■□□□□ 0.06
Rpa1Q8VEE4 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rpa1Q8VEE4 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms