Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm1Q8VC85 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm1Q8VC85 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm1Q8VC85 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm1Q8VC85 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm1Q8VC85 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm1Q8VC85 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm1Q8VC85 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Lsm1Q8VC85 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm1Q8VC85 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Lsm1Q8VC85 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Lsm1Q8VC85 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm1Q8VC85 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm1Q8VC85 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm1Q8VC85 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm1Q8VC85 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm1Q8VC85 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.66□□□□□ -0.06
Lsm1Q8VC85 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.66□□□□□ -0.06
Lsm1Q8VC85 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.66□□□□□ -0.06
Lsm1Q8VC85 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm1Q8VC85 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm1Q8VC85 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Lsm1Q8VC85 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.66□□□□□ -0.06
Lsm1Q8VC85 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.66□□□□□ -0.06
Lsm1Q8VC85 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.66□□□□□ -0.06
Lsm1Q8VC85 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm1Q8VC85 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm1Q8VC85 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm1Q8VC85 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm1Q8VC85 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm1Q8VC85 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm1Q8VC85 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Lsm1Q8VC85 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Gm8097-201ENSMUST00000117903 829 ntBASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Gm15358-201ENSMUST00000119249 520 ntBASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Lsm1Q8VC85 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.64□□□□□ -0.07
Lsm1Q8VC85 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Lsm1Q8VC85 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms