Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox30Q8CGW4 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Sox30Q8CGW4 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sox30Q8CGW4 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sox30Q8CGW4 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox30Q8CGW4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox30Q8CGW4 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox30Q8CGW4 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox30Q8CGW4 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox30Q8CGW4 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sox30Q8CGW4 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.71■□□□□ 0.27
Sox30Q8CGW4 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Sox30Q8CGW4 AA414768-201ENSMUST00000121924 1257 ntBASIC16.71■□□□□ 0.27
Sox30Q8CGW4 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.71■□□□□ 0.27
Sox30Q8CGW4 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox30Q8CGW4 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sox30Q8CGW4 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Sox30Q8CGW4 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Sox30Q8CGW4 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.71■□□□□ 0.26
Sox30Q8CGW4 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
Sox30Q8CGW4 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Sox30Q8CGW4 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox30Q8CGW4 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox30Q8CGW4 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox30Q8CGW4 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sox30Q8CGW4 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox30Q8CGW4 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox30Q8CGW4 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.7■□□□□ 0.26
Sox30Q8CGW4 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Sox30Q8CGW4 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.7■□□□□ 0.26
Sox30Q8CGW4 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox30Q8CGW4 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox30Q8CGW4 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Sox30Q8CGW4 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Sox30Q8CGW4 Gm43767-201ENSMUST00000198933 381 ntBASIC16.7■□□□□ 0.26
Sox30Q8CGW4 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Sox30Q8CGW4 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.7■□□□□ 0.26
Sox30Q8CGW4 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox30Q8CGW4 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox30Q8CGW4 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox30Q8CGW4 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox30Q8CGW4 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sox30Q8CGW4 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox30Q8CGW4 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox30Q8CGW4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox30Q8CGW4 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.68■□□□□ 0.26
Sox30Q8CGW4 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox30Q8CGW4 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.68■□□□□ 0.26
Sox30Q8CGW4 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox30Q8CGW4 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox30Q8CGW4 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox30Q8CGW4 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox30Q8CGW4 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox30Q8CGW4 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Sox30Q8CGW4 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.68■□□□□ 0.26
Sox30Q8CGW4 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox30Q8CGW4 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.68■□□□□ 0.26
Sox30Q8CGW4 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.68■□□□□ 0.26
Sox30Q8CGW4 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox30Q8CGW4 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.68■□□□□ 0.26
Sox30Q8CGW4 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.68■□□□□ 0.26
Sox30Q8CGW4 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sox30Q8CGW4 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sox30Q8CGW4 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.68■□□□□ 0.26
Sox30Q8CGW4 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sox30Q8CGW4 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms