Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC18.79■□□□□ 0.6
Smc4Q8CG47 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Smc4Q8CG47 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc4Q8CG47 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.79■□□□□ 0.6
Smc4Q8CG47 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc4Q8CG47 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smc4Q8CG47 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc4Q8CG47 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Smc4Q8CG47 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc4Q8CG47 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC18.79■□□□□ 0.6
Smc4Q8CG47 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc4Q8CG47 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc4Q8CG47 App-207ENSMUST00000227737 2827 ntBASIC18.78■□□□□ 0.6
Smc4Q8CG47 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc4Q8CG47 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc4Q8CG47 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smc4Q8CG47 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc4Q8CG47 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Smc4Q8CG47 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Smc4Q8CG47 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc4Q8CG47 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc4Q8CG47 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc4Q8CG47 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Smc4Q8CG47 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC18.78■□□□□ 0.6
Smc4Q8CG47 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc4Q8CG47 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc4Q8CG47 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC18.78■□□□□ 0.6
Smc4Q8CG47 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.78■□□□□ 0.6
Smc4Q8CG47 Gm27494-201ENSMUST00000184735 189 ntBASIC18.78■□□□□ 0.6
Smc4Q8CG47 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smc4Q8CG47 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.78■□□□□ 0.6
Smc4Q8CG47 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smc4Q8CG47 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC18.78■□□□□ 0.6
Smc4Q8CG47 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc4Q8CG47 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smc4Q8CG47 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc4Q8CG47 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Smc4Q8CG47 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Smc4Q8CG47 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc4Q8CG47 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc4Q8CG47 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smc4Q8CG47 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Smc4Q8CG47 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc4Q8CG47 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc4Q8CG47 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc4Q8CG47 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Smc4Q8CG47 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc4Q8CG47 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc4Q8CG47 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.77■□□□□ 0.6
Smc4Q8CG47 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC18.77■□□□□ 0.6
Smc4Q8CG47 Gm11025-201ENSMUST00000140773 466 ntBASIC18.77■□□□□ 0.6
Smc4Q8CG47 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc4Q8CG47 Gm45612-201ENSMUST00000211320 160 ntBASIC18.77■□□□□ 0.6
Smc4Q8CG47 Chchd1-203ENSMUST00000224633 557 ntBASIC18.77■□□□□ 0.6
Smc4Q8CG47 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.77■□□□□ 0.6
Smc4Q8CG47 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.77■□□□□ 0.6
Smc4Q8CG47 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Smc4Q8CG47 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smc4Q8CG47 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc4Q8CG47 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc4Q8CG47 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc4Q8CG47 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc4Q8CG47 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc4Q8CG47 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.77■□□□□ 0.6
Smc4Q8CG47 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smc4Q8CG47 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.77■□□□□ 0.59
Smc4Q8CG47 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smc4Q8CG47 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc4Q8CG47 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc4Q8CG47 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc4Q8CG47 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc4Q8CG47 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc4Q8CG47 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.76■□□□□ 0.59
Smc4Q8CG47 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc4Q8CG47 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.76■□□□□ 0.59
Smc4Q8CG47 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smc4Q8CG47 Gm6226-201ENSMUST00000117765 1146 ntBASIC18.76■□□□□ 0.59
Smc4Q8CG47 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC18.76■□□□□ 0.59
Smc4Q8CG47 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc4Q8CG47 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC18.76■□□□□ 0.59
Smc4Q8CG47 Gm10154-201ENSMUST00000084445 354 ntBASIC18.76■□□□□ 0.59
Smc4Q8CG47 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc4Q8CG47 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.76■□□□□ 0.59
Smc4Q8CG47 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc4Q8CG47 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc4Q8CG47 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc4Q8CG47 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc4Q8CG47 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc4Q8CG47 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Smc4Q8CG47 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc4Q8CG47 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Smc4Q8CG47 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc4Q8CG47 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc4Q8CG47 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc4Q8CG47 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Smc4Q8CG47 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Smc4Q8CG47 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc4Q8CG47 Gm16198-201ENSMUST00000118766 670 ntBASIC18.75■□□□□ 0.59
Smc4Q8CG47 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc4Q8CG47 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms