Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shisa4Q8CA71 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shisa4Q8CA71 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shisa4Q8CA71 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shisa4Q8CA71 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.68■□□□□ 0.42
Shisa4Q8CA71 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shisa4Q8CA71 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shisa4Q8CA71 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shisa4Q8CA71 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shisa4Q8CA71 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shisa4Q8CA71 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shisa4Q8CA71 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shisa4Q8CA71 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shisa4Q8CA71 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shisa4Q8CA71 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.68■□□□□ 0.42
Shisa4Q8CA71 Mir8117-201ENSMUST00000184773 107 ntBASIC17.68■□□□□ 0.42
Shisa4Q8CA71 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.68■□□□□ 0.42
Shisa4Q8CA71 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shisa4Q8CA71 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shisa4Q8CA71 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shisa4Q8CA71 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.68■□□□□ 0.42
Shisa4Q8CA71 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Shisa4Q8CA71 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shisa4Q8CA71 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shisa4Q8CA71 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shisa4Q8CA71 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Shisa4Q8CA71 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Shisa4Q8CA71 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.67■□□□□ 0.42
Shisa4Q8CA71 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Shisa4Q8CA71 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shisa4Q8CA71 Gm43767-201ENSMUST00000198933 381 ntBASIC17.67■□□□□ 0.42
Shisa4Q8CA71 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Shisa4Q8CA71 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shisa4Q8CA71 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Shisa4Q8CA71 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Shisa4Q8CA71 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Shisa4Q8CA71 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shisa4Q8CA71 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shisa4Q8CA71 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shisa4Q8CA71 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shisa4Q8CA71 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa4Q8CA71 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa4Q8CA71 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa4Q8CA71 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.66■□□□□ 0.42
Shisa4Q8CA71 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa4Q8CA71 Efs-202ENSMUST00000227037 2540 ntBASIC17.66■□□□□ 0.42
Shisa4Q8CA71 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa4Q8CA71 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa4Q8CA71 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Shisa4Q8CA71 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa4Q8CA71 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.66■□□□□ 0.42
Shisa4Q8CA71 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa4Q8CA71 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Shisa4Q8CA71 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.66■□□□□ 0.42
Shisa4Q8CA71 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa4Q8CA71 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.66■□□□□ 0.42
Shisa4Q8CA71 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa4Q8CA71 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Shisa4Q8CA71 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa4Q8CA71 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
Shisa4Q8CA71 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Shisa4Q8CA71 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa4Q8CA71 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shisa4Q8CA71 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shisa4Q8CA71 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.65■□□□□ 0.42
Shisa4Q8CA71 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shisa4Q8CA71 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shisa4Q8CA71 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.65■□□□□ 0.42
Shisa4Q8CA71 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shisa4Q8CA71 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Shisa4Q8CA71 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Shisa4Q8CA71 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shisa4Q8CA71 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shisa4Q8CA71 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shisa4Q8CA71 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.65■□□□□ 0.42
Shisa4Q8CA71 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.65■□□□□ 0.42
Shisa4Q8CA71 Gm27301-201ENSMUST00000184012 127 ntBASIC17.65■□□□□ 0.42
Shisa4Q8CA71 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.65■□□□□ 0.42
Shisa4Q8CA71 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shisa4Q8CA71 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shisa4Q8CA71 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shisa4Q8CA71 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shisa4Q8CA71 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shisa4Q8CA71 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shisa4Q8CA71 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shisa4Q8CA71 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shisa4Q8CA71 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shisa4Q8CA71 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shisa4Q8CA71 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shisa4Q8CA71 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.65■□□□□ 0.42
Shisa4Q8CA71 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shisa4Q8CA71 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Shisa4Q8CA71 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.42
Shisa4Q8CA71 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Shisa4Q8CA71 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Shisa4Q8CA71 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Shisa4Q8CA71 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.64■□□□□ 0.42
Shisa4Q8CA71 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Shisa4Q8CA71 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.64■□□□□ 0.41
Shisa4Q8CA71 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms