Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtp1Q8C8C1 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rtp1Q8C8C1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rtp1Q8C8C1 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtp1Q8C8C1 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rtp1Q8C8C1 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtp1Q8C8C1 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtp1Q8C8C1 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtp1Q8C8C1 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Rtp1Q8C8C1 Gm12859-201ENSMUST00000117834 427 ntBASIC17.37■□□□□ 0.37
Rtp1Q8C8C1 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtp1Q8C8C1 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtp1Q8C8C1 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rtp1Q8C8C1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtp1Q8C8C1 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtp1Q8C8C1 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtp1Q8C8C1 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtp1Q8C8C1 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rtp1Q8C8C1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rtp1Q8C8C1 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtp1Q8C8C1 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.37■□□□□ 0.37
Rtp1Q8C8C1 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtp1Q8C8C1 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rtp1Q8C8C1 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.37■□□□□ 0.37
Rtp1Q8C8C1 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtp1Q8C8C1 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtp1Q8C8C1 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtp1Q8C8C1 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rtp1Q8C8C1 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtp1Q8C8C1 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.36■□□□□ 0.37
Rtp1Q8C8C1 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtp1Q8C8C1 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtp1Q8C8C1 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtp1Q8C8C1 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.36■□□□□ 0.37
Rtp1Q8C8C1 Gm6912-201ENSMUST00000117218 544 ntBASIC17.36■□□□□ 0.37
Rtp1Q8C8C1 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC17.36■□□□□ 0.37
Rtp1Q8C8C1 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rtp1Q8C8C1 AL593843.1-201ENSMUST00000195891 145 ntBASIC17.36■□□□□ 0.37
Rtp1Q8C8C1 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rtp1Q8C8C1 Gm18049-201ENSMUST00000208909 581 ntBASIC17.36■□□□□ 0.37
Rtp1Q8C8C1 Gm7775-201ENSMUST00000218871 853 ntBASIC17.36■□□□□ 0.37
Rtp1Q8C8C1 AC154239.3-201ENSMUST00000226933 674 ntBASIC17.36■□□□□ 0.37
Rtp1Q8C8C1 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtp1Q8C8C1 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtp1Q8C8C1 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rtp1Q8C8C1 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rtp1Q8C8C1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtp1Q8C8C1 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtp1Q8C8C1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtp1Q8C8C1 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtp1Q8C8C1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtp1Q8C8C1 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtp1Q8C8C1 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
Rtp1Q8C8C1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtp1Q8C8C1 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rtp1Q8C8C1 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rtp1Q8C8C1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Rtp1Q8C8C1 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.35■□□□□ 0.37
Rtp1Q8C8C1 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtp1Q8C8C1 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtp1Q8C8C1 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtp1Q8C8C1 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC17.35■□□□□ 0.37
Rtp1Q8C8C1 Gm6745-201ENSMUST00000199216 526 ntBASIC17.35■□□□□ 0.37
Rtp1Q8C8C1 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rtp1Q8C8C1 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Rtp1Q8C8C1 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC17.35■□□□□ 0.37
Rtp1Q8C8C1 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtp1Q8C8C1 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtp1Q8C8C1 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtp1Q8C8C1 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Rtp1Q8C8C1 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtp1Q8C8C1 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtp1Q8C8C1 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Rtp1Q8C8C1 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Rtp1Q8C8C1 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtp1Q8C8C1 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rtp1Q8C8C1 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rtp1Q8C8C1 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtp1Q8C8C1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
Rtp1Q8C8C1 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtp1Q8C8C1 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtp1Q8C8C1 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rtp1Q8C8C1 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.34■□□□□ 0.37
Rtp1Q8C8C1 Gm28631-201ENSMUST00000190740 334 ntBASIC17.34■□□□□ 0.37
Rtp1Q8C8C1 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rtp1Q8C8C1 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtp1Q8C8C1 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Rtp1Q8C8C1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtp1Q8C8C1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtp1Q8C8C1 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rtp1Q8C8C1 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rtp1Q8C8C1 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rtp1Q8C8C1 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rtp1Q8C8C1 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rtp1Q8C8C1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rtp1Q8C8C1 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rtp1Q8C8C1 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.33■□□□□ 0.37
Rtp1Q8C8C1 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Rtp1Q8C8C1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rtp1Q8C8C1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms