Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm11Q8BUV6 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.03□□□□□ -0.32
Lsm11Q8BUV6 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm11Q8BUV6 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm11Q8BUV6 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Lsm11Q8BUV6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.03□□□□□ -0.32
Lsm11Q8BUV6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC13.03□□□□□ -0.32
Lsm11Q8BUV6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.03□□□□□ -0.32
Lsm11Q8BUV6 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm11Q8BUV6 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm11Q8BUV6 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.03□□□□□ -0.32
Lsm11Q8BUV6 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm11Q8BUV6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Lsm11Q8BUV6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.03□□□□□ -0.32
Lsm11Q8BUV6 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Lsm11Q8BUV6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm11Q8BUV6 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm11Q8BUV6 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm11Q8BUV6 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Lsm11Q8BUV6 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm11Q8BUV6 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Lsm11Q8BUV6 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Lsm11Q8BUV6 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm11Q8BUV6 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm11Q8BUV6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm11Q8BUV6 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm11Q8BUV6 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm11Q8BUV6 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
Lsm11Q8BUV6 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm11Q8BUV6 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm11Q8BUV6 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm11Q8BUV6 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.02□□□□□ -0.32
Lsm11Q8BUV6 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm11Q8BUV6 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.02□□□□□ -0.32
Lsm11Q8BUV6 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm11Q8BUV6 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm11Q8BUV6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm11Q8BUV6 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC13.02□□□□□ -0.33
Lsm11Q8BUV6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm11Q8BUV6 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm11Q8BUV6 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Lsm11Q8BUV6 Gm18101-201ENSMUST00000215769 548 ntBASIC13.02□□□□□ -0.33
Lsm11Q8BUV6 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.02□□□□□ -0.33
Lsm11Q8BUV6 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm11Q8BUV6 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm11Q8BUV6 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm11Q8BUV6 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Lsm11Q8BUV6 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Lsm11Q8BUV6 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm11Q8BUV6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.02□□□□□ -0.33
Lsm11Q8BUV6 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm11Q8BUV6 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm11Q8BUV6 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Lsm11Q8BUV6 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.02□□□□□ -0.33
Lsm11Q8BUV6 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm11Q8BUV6 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Gm14716-201ENSMUST00000120138 718 ntBASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Gm25406-201ENSMUST00000157599 105 ntBASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm11Q8BUV6 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm11Q8BUV6 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Lsm11Q8BUV6 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm11Q8BUV6 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm11Q8BUV6 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm11Q8BUV6 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm11Q8BUV6 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lsm11Q8BUV6 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13□□□□□ -0.33
Lsm11Q8BUV6 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lsm11Q8BUV6 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms