Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdhr3Q8BL00 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdhr3Q8BL00 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdhr3Q8BL00 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.36□□□□□ -0.27
Cdhr3Q8BL00 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdhr3Q8BL00 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdhr3Q8BL00 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdhr3Q8BL00 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdhr3Q8BL00 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdhr3Q8BL00 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdhr3Q8BL00 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.36□□□□□ -0.27
Cdhr3Q8BL00 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdhr3Q8BL00 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdhr3Q8BL00 Olfr129-201ENSMUST00000122318 993 ntBASIC13.36□□□□□ -0.27
Cdhr3Q8BL00 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdhr3Q8BL00 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.36□□□□□ -0.27
Cdhr3Q8BL00 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.36□□□□□ -0.27
Cdhr3Q8BL00 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdhr3Q8BL00 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdhr3Q8BL00 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdhr3Q8BL00 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.36□□□□□ -0.27
Cdhr3Q8BL00 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdhr3Q8BL00 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Cdhr3Q8BL00 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdhr3Q8BL00 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdhr3Q8BL00 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdhr3Q8BL00 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdhr3Q8BL00 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cdhr3Q8BL00 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdhr3Q8BL00 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 Gm23634-201ENSMUST00000175071 91 ntBASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdhr3Q8BL00 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cdhr3Q8BL00 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.33□□□□□ -0.27
Cdhr3Q8BL00 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms