Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nop53Q8BK35 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Nop53Q8BK35 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Nop53Q8BK35 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nop53Q8BK35 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nop53Q8BK35 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.4■□□□□ 0.22
Nop53Q8BK35 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nop53Q8BK35 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nop53Q8BK35 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nop53Q8BK35 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Nop53Q8BK35 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Nop53Q8BK35 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.22
Nop53Q8BK35 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Nop53Q8BK35 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nop53Q8BK35 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nop53Q8BK35 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nop53Q8BK35 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nop53Q8BK35 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nop53Q8BK35 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nop53Q8BK35 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nop53Q8BK35 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Nop53Q8BK35 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Nop53Q8BK35 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.39■□□□□ 0.21
Nop53Q8BK35 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
Nop53Q8BK35 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nop53Q8BK35 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nop53Q8BK35 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nop53Q8BK35 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nop53Q8BK35 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nop53Q8BK35 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nop53Q8BK35 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nop53Q8BK35 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nop53Q8BK35 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nop53Q8BK35 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nop53Q8BK35 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.39■□□□□ 0.21
Nop53Q8BK35 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Nop53Q8BK35 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nop53Q8BK35 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nop53Q8BK35 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.38■□□□□ 0.21
Nop53Q8BK35 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Nop53Q8BK35 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Nop53Q8BK35 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Nop53Q8BK35 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nop53Q8BK35 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nop53Q8BK35 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Nop53Q8BK35 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Nop53Q8BK35 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nop53Q8BK35 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nop53Q8BK35 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nop53Q8BK35 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nop53Q8BK35 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Nop53Q8BK35 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Nop53Q8BK35 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nop53Q8BK35 Gm44454-201ENSMUST00000198541 138 ntBASIC16.38■□□□□ 0.21
Nop53Q8BK35 Gm9172-201ENSMUST00000212092 954 ntBASIC16.38■□□□□ 0.21
Nop53Q8BK35 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.38■□□□□ 0.21
Nop53Q8BK35 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Nop53Q8BK35 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nop53Q8BK35 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nop53Q8BK35 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.38■□□□□ 0.21
Nop53Q8BK35 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Nop53Q8BK35 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nop53Q8BK35 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.38■□□□□ 0.21
Nop53Q8BK35 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Nop53Q8BK35 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nop53Q8BK35 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nop53Q8BK35 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nop53Q8BK35 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nop53Q8BK35 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Nop53Q8BK35 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.38■□□□□ 0.21
Nop53Q8BK35 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nop53Q8BK35 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nop53Q8BK35 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nop53Q8BK35 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Nop53Q8BK35 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.37■□□□□ 0.21
Nop53Q8BK35 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Nop53Q8BK35 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nop53Q8BK35 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nop53Q8BK35 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nop53Q8BK35 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nop53Q8BK35 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nop53Q8BK35 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Nop53Q8BK35 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nop53Q8BK35 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nop53Q8BK35 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Nop53Q8BK35 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Nop53Q8BK35 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Nop53Q8BK35 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.37■□□□□ 0.21
Nop53Q8BK35 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
Nop53Q8BK35 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nop53Q8BK35 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nop53Q8BK35 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nop53Q8BK35 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nop53Q8BK35 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nop53Q8BK35 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nop53Q8BK35 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nop53Q8BK35 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nop53Q8BK35 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nop53Q8BK35 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nop53Q8BK35 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms