Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim6Q8BGE7 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trim6Q8BGE7 Gm10013-201ENSMUST00000106074 672 ntBASIC16.26■□□□□ 0.19
Trim6Q8BGE7 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.26■□□□□ 0.19
Trim6Q8BGE7 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim6Q8BGE7 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trim6Q8BGE7 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Trim6Q8BGE7 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim6Q8BGE7 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim6Q8BGE7 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim6Q8BGE7 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim6Q8BGE7 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim6Q8BGE7 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim6Q8BGE7 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim6Q8BGE7 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim6Q8BGE7 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.26■□□□□ 0.19
Trim6Q8BGE7 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim6Q8BGE7 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim6Q8BGE7 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim6Q8BGE7 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trim6Q8BGE7 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim6Q8BGE7 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim6Q8BGE7 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim6Q8BGE7 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trim6Q8BGE7 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim6Q8BGE7 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim6Q8BGE7 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim6Q8BGE7 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim6Q8BGE7 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim6Q8BGE7 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim6Q8BGE7 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim6Q8BGE7 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trim6Q8BGE7 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.25■□□□□ 0.19
Trim6Q8BGE7 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim6Q8BGE7 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim6Q8BGE7 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.25■□□□□ 0.19
Trim6Q8BGE7 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.25■□□□□ 0.19
Trim6Q8BGE7 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim6Q8BGE7 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim6Q8BGE7 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim6Q8BGE7 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim6Q8BGE7 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
Trim6Q8BGE7 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim6Q8BGE7 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim6Q8BGE7 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim6Q8BGE7 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim6Q8BGE7 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim6Q8BGE7 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trim6Q8BGE7 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim6Q8BGE7 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim6Q8BGE7 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim6Q8BGE7 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim6Q8BGE7 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim6Q8BGE7 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim6Q8BGE7 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim6Q8BGE7 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.24■□□□□ 0.19
Trim6Q8BGE7 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim6Q8BGE7 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim6Q8BGE7 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim6Q8BGE7 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trim6Q8BGE7 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim6Q8BGE7 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim6Q8BGE7 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim6Q8BGE7 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim6Q8BGE7 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim6Q8BGE7 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.24■□□□□ 0.19
Trim6Q8BGE7 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.24■□□□□ 0.19
Trim6Q8BGE7 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim6Q8BGE7 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.24■□□□□ 0.19
Trim6Q8BGE7 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim6Q8BGE7 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim6Q8BGE7 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim6Q8BGE7 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim6Q8BGE7 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trim6Q8BGE7 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim6Q8BGE7 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim6Q8BGE7 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim6Q8BGE7 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim6Q8BGE7 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trim6Q8BGE7 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trim6Q8BGE7 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.23■□□□□ 0.19
Trim6Q8BGE7 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim6Q8BGE7 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.23■□□□□ 0.19
Trim6Q8BGE7 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.23■□□□□ 0.19
Trim6Q8BGE7 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim6Q8BGE7 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.23■□□□□ 0.19
Trim6Q8BGE7 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim6Q8BGE7 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Trim6Q8BGE7 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim6Q8BGE7 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim6Q8BGE7 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim6Q8BGE7 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim6Q8BGE7 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim6Q8BGE7 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.23■□□□□ 0.19
Trim6Q8BGE7 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim6Q8BGE7 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trim6Q8BGE7 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim6Q8BGE7 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim6Q8BGE7 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trim6Q8BGE7 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms