Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Upk3bQ80YF6 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bQ80YF6 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bQ80YF6 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bQ80YF6 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Upk3bQ80YF6 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bQ80YF6 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bQ80YF6 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bQ80YF6 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bQ80YF6 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bQ80YF6 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bQ80YF6 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bQ80YF6 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bQ80YF6 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bQ80YF6 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bQ80YF6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bQ80YF6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bQ80YF6 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.93□□□□□ -0.34
Upk3bQ80YF6 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bQ80YF6 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bQ80YF6 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.93□□□□□ -0.34
Upk3bQ80YF6 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bQ80YF6 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bQ80YF6 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Upk3bQ80YF6 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bQ80YF6 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Upk3bQ80YF6 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bQ80YF6 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bQ80YF6 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bQ80YF6 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Upk3bQ80YF6 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bQ80YF6 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bQ80YF6 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bQ80YF6 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Upk3bQ80YF6 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bQ80YF6 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bQ80YF6 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bQ80YF6 Gm15565-201ENSMUST00000118890 427 ntBASIC12.92□□□□□ -0.34
Upk3bQ80YF6 Gm13312-201ENSMUST00000119631 718 ntBASIC12.92□□□□□ -0.34
Upk3bQ80YF6 Gm12134-201ENSMUST00000122109 520 ntBASIC12.92□□□□□ -0.34
Upk3bQ80YF6 Gm5587-201ENSMUST00000206270 674 ntBASIC12.92□□□□□ -0.34
Upk3bQ80YF6 Gm9172-201ENSMUST00000212092 954 ntBASIC12.92□□□□□ -0.34
Upk3bQ80YF6 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.92□□□□□ -0.34
Upk3bQ80YF6 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bQ80YF6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bQ80YF6 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bQ80YF6 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bQ80YF6 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bQ80YF6 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bQ80YF6 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bQ80YF6 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bQ80YF6 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Upk3bQ80YF6 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bQ80YF6 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bQ80YF6 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Upk3bQ80YF6 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Gm19164-201ENSMUST00000210667 640 ntBASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Gm45328-201ENSMUST00000210942 917 ntBASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Upk3bQ80YF6 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms