Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc116Q80X53 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.98□□□□□ -0.01
Ccdc116Q80X53 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc116Q80X53 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc116Q80X53 Gm8318-201ENSMUST00000182954 872 ntBASIC14.98□□□□□ -0.01
Ccdc116Q80X53 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.98□□□□□ -0.01
Ccdc116Q80X53 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.98□□□□□ -0.01
Ccdc116Q80X53 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.98□□□□□ -0.01
Ccdc116Q80X53 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc116Q80X53 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc116Q80X53 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc116Q80X53 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc116Q80X53 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc116Q80X53 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ccdc116Q80X53 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc116Q80X53 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.98□□□□□ -0.01
Ccdc116Q80X53 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ccdc116Q80X53 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc116Q80X53 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.97□□□□□ -0.01
Ccdc116Q80X53 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ccdc116Q80X53 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc116Q80X53 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Ccdc116Q80X53 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc116Q80X53 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc116Q80X53 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc116Q80X53 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc116Q80X53 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.97□□□□□ -0.01
Ccdc116Q80X53 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc116Q80X53 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc116Q80X53 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.97□□□□□ -0.01
Ccdc116Q80X53 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.97□□□□□ -0.01
Ccdc116Q80X53 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc116Q80X53 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc116Q80X53 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.97□□□□□ -0.01
Ccdc116Q80X53 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc116Q80X53 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc116Q80X53 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.97□□□□□ -0.01
Ccdc116Q80X53 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc116Q80X53 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.97□□□□□ -0.01
Ccdc116Q80X53 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc116Q80X53 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc116Q80X53 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc116Q80X53 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc116Q80X53 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc116Q80X53 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Ccdc116Q80X53 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.97□□□□□ -0.01
Ccdc116Q80X53 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc116Q80X53 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc116Q80X53 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc116Q80X53 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ccdc116Q80X53 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc116Q80X53 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc116Q80X53 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Ccdc116Q80X53 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc116Q80X53 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc116Q80X53 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Ccdc116Q80X53 Gm13418-201ENSMUST00000119097 944 ntBASIC14.96□□□□□ -0.01
Ccdc116Q80X53 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc116Q80X53 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.96□□□□□ -0.01
Ccdc116Q80X53 Gm4535-201ENSMUST00000182274 558 ntBASIC14.96□□□□□ -0.01
Ccdc116Q80X53 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.96□□□□□ -0.01
Ccdc116Q80X53 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.96□□□□□ -0.01
Ccdc116Q80X53 Sybu-209ENSMUST00000228639 4113 ntBASIC14.96□□□□□ -0.01
Ccdc116Q80X53 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc116Q80X53 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc116Q80X53 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc116Q80X53 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc116Q80X53 Gm10355-201ENSMUST00000097146 517 ntBASIC14.96□□□□□ -0.01
Ccdc116Q80X53 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Ccdc116Q80X53 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc116Q80X53 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.96□□□□□ -0.01
Ccdc116Q80X53 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ccdc116Q80X53 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.96□□□□□ -0.02
Ccdc116Q80X53 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Ccdc116Q80X53 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.96□□□□□ -0.02
Ccdc116Q80X53 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccdc116Q80X53 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccdc116Q80X53 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccdc116Q80X53 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ccdc116Q80X53 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc116Q80X53 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc116Q80X53 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc116Q80X53 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc116Q80X53 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc116Q80X53 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc116Q80X53 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc116Q80X53 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc116Q80X53 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Ccdc116Q80X53 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc116Q80X53 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc116Q80X53 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc116Q80X53 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc116Q80X53 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc116Q80X53 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Ccdc116Q80X53 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Ccdc116Q80X53 Gm9103-201ENSMUST00000119371 405 ntBASIC14.95□□□□□ -0.02
Ccdc116Q80X53 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ccdc116Q80X53 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.95□□□□□ -0.02
Ccdc116Q80X53 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ccdc116Q80X53 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms