Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Krt39Q6IFX4 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.91■□□□□ 0.3
Krt39Q6IFX4 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt39Q6IFX4 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Krt39Q6IFX4 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt39Q6IFX4 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt39Q6IFX4 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt39Q6IFX4 Ank2-226ENSMUST00000189368 339 ntBASIC16.91■□□□□ 0.3
Krt39Q6IFX4 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.91■□□□□ 0.3
Krt39Q6IFX4 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt39Q6IFX4 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Krt39Q6IFX4 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt39Q6IFX4 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt39Q6IFX4 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Krt39Q6IFX4 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Krt39Q6IFX4 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt39Q6IFX4 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt39Q6IFX4 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt39Q6IFX4 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Krt39Q6IFX4 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.91■□□□□ 0.3
Krt39Q6IFX4 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt39Q6IFX4 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.9■□□□□ 0.3
Krt39Q6IFX4 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Krt39Q6IFX4 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Krt39Q6IFX4 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Krt39Q6IFX4 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Krt39Q6IFX4 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Krt39Q6IFX4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Krt39Q6IFX4 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.9■□□□□ 0.3
Krt39Q6IFX4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Krt39Q6IFX4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.9■□□□□ 0.3
Krt39Q6IFX4 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.9■□□□□ 0.3
Krt39Q6IFX4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.9■□□□□ 0.3
Krt39Q6IFX4 Gm10819-201ENSMUST00000099988 561 ntBASIC16.9■□□□□ 0.3
Krt39Q6IFX4 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Krt39Q6IFX4 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Krt39Q6IFX4 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Krt39Q6IFX4 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Krt39Q6IFX4 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Krt39Q6IFX4 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Krt39Q6IFX4 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Krt39Q6IFX4 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Krt39Q6IFX4 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Krt39Q6IFX4 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Krt39Q6IFX4 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Krt39Q6IFX4 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Krt39Q6IFX4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Krt39Q6IFX4 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Krt39Q6IFX4 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Krt39Q6IFX4 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Krt39Q6IFX4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Krt39Q6IFX4 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Krt39Q6IFX4 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Krt39Q6IFX4 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Krt39Q6IFX4 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Krt39Q6IFX4 Gm17807-201ENSMUST00000186869 298 ntBASIC16.89■□□□□ 0.29
Krt39Q6IFX4 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.89■□□□□ 0.29
Krt39Q6IFX4 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Krt39Q6IFX4 Gm19164-201ENSMUST00000210667 640 ntBASIC16.89■□□□□ 0.29
Krt39Q6IFX4 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Krt39Q6IFX4 Gm18622-201ENSMUST00000219361 595 ntBASIC16.89■□□□□ 0.29
Krt39Q6IFX4 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Krt39Q6IFX4 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Krt39Q6IFX4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Krt39Q6IFX4 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Krt39Q6IFX4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Krt39Q6IFX4 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Krt39Q6IFX4 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Krt39Q6IFX4 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Krt39Q6IFX4 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Krt39Q6IFX4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Krt39Q6IFX4 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Krt39Q6IFX4 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
Krt39Q6IFX4 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Krt39Q6IFX4 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Krt39Q6IFX4 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Krt39Q6IFX4 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Krt39Q6IFX4 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Krt39Q6IFX4 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Krt39Q6IFX4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.88■□□□□ 0.29
Krt39Q6IFX4 Gm25745-201ENSMUST00000174945 133 ntBASIC16.88■□□□□ 0.29
Krt39Q6IFX4 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Krt39Q6IFX4 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Krt39Q6IFX4 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Krt39Q6IFX4 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Krt39Q6IFX4 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Krt39Q6IFX4 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Krt39Q6IFX4 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Krt39Q6IFX4 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Krt39Q6IFX4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Krt39Q6IFX4 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Krt39Q6IFX4 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Krt39Q6IFX4 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Krt39Q6IFX4 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Krt39Q6IFX4 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Krt39Q6IFX4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Krt39Q6IFX4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Krt39Q6IFX4 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Krt39Q6IFX4 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Krt39Q6IFX4 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms