Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Traf4Q61382 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Traf4Q61382 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Traf4Q61382 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Traf4Q61382 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Traf4Q61382 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Traf4Q61382 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Traf4Q61382 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Traf4Q61382 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Traf4Q61382 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Traf4Q61382 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Traf4Q61382 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Traf4Q61382 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Traf4Q61382 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Traf4Q61382 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Traf4Q61382 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Traf4Q61382 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Traf4Q61382 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Traf4Q61382 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Traf4Q61382 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Traf4Q61382 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Traf4Q61382 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.59□□□□□ -0.23
Traf4Q61382 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Traf4Q61382 Gm7230-201ENSMUST00000173026 815 ntBASIC13.59□□□□□ -0.23
Traf4Q61382 Mir5126-201ENSMUST00000175513 77 ntBASIC13.59□□□□□ -0.23
Traf4Q61382 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.59□□□□□ -0.23
Traf4Q61382 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
Traf4Q61382 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Traf4Q61382 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Traf4Q61382 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Traf4Q61382 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Traf4Q61382 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Traf4Q61382 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Traf4Q61382 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Traf4Q61382 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Traf4Q61382 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Traf4Q61382 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Traf4Q61382 Sybu-209ENSMUST00000228639 4113 ntBASIC13.59□□□□□ -0.23
Traf4Q61382 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Traf4Q61382 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Traf4Q61382 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Traf4Q61382 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Traf4Q61382 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Traf4Q61382 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Traf4Q61382 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Traf4Q61382 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Traf4Q61382 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.59□□□□□ -0.23
Traf4Q61382 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Traf4Q61382 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Traf4Q61382 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Traf4Q61382 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Traf4Q61382 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Traf4Q61382 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Traf4Q61382 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Traf4Q61382 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Traf4Q61382 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Traf4Q61382 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Traf4Q61382 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Traf4Q61382 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Traf4Q61382 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Traf4Q61382 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Traf4Q61382 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Traf4Q61382 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.58□□□□□ -0.24
Traf4Q61382 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.58□□□□□ -0.24
Traf4Q61382 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.58□□□□□ -0.24
Traf4Q61382 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Traf4Q61382 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Traf4Q61382 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.58□□□□□ -0.24
Traf4Q61382 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.58□□□□□ -0.24
Traf4Q61382 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.58□□□□□ -0.24
Traf4Q61382 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.58□□□□□ -0.24
Traf4Q61382 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Traf4Q61382 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Traf4Q61382 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Traf4Q61382 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Traf4Q61382 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Traf4Q61382 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Traf4Q61382 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Traf4Q61382 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Traf4Q61382 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Traf4Q61382 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.58□□□□□ -0.24
Traf4Q61382 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.57□□□□□ -0.24
Traf4Q61382 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Traf4Q61382 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Traf4Q61382 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Traf4Q61382 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Traf4Q61382 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Traf4Q61382 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Traf4Q61382 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Traf4Q61382 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Traf4Q61382 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Traf4Q61382 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Traf4Q61382 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Traf4Q61382 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Traf4Q61382 Gm4459-201ENSMUST00000118750 468 ntBASIC13.57□□□□□ -0.24
Traf4Q61382 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.57□□□□□ -0.24
Traf4Q61382 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Traf4Q61382 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.57□□□□□ -0.24
Traf4Q61382 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Traf4Q61382 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms